Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00274 ATGGCTTCGTCACCGTCACCGGCAATGTCAGTGAACCCCGGTCGCATTCGGACCCTCAAAGAAGGCTCAGGAAAAACCGGTCCGGTCGTTTATTGGATGTTCAGAGATCAACGGTTGAAAGACAATTGGGCTCTCATCCACGCCGTTCATCAAGCCAACAAATCAAACGTTCCAGTTGCCGTTGTTTTCAATCTCTTCGATCACTTCATCGGTGCAAAGTCTCGTCATTTTGGGTTCATGCTCAAAGGTTTGCGCCAATTGTCTCACCAATTGCAACACACTCTTCAAATACCCTTTTTCTTGTTTCGGGGTGAAGCAGAGGAAACTGTATCAAAATTTGTTAGAGAATGTGGAGCTTCTTTGTTGGTGACAGACATGTCACCATTACGAGAAATGAAGAAATGTAAAGCTGAGATTTGTGAGAAGGTAAGCGATTTGGTTACGGTTCATGAAGTAGACGCTCACAACGTTGTGCCACTTTGGGTAGCTTCCGATAAATTGGAGTATAGTGCTAGGACAATAAGGGGAAAGATAAACAAAAAGCTTTCTGAGTATCTCGTTGATTTTCCTAATATTGAACCGCCAAATACGAAATGGGTCATTTCTGAAGATCACTACATTGATTGGGATGGTATCATTGCTCAAGTGTTAAGGAATGGAGCTGAGGTACCTGAAGTTGATTGGTGTGAGCCTGGGGAAATTGCCGCAATGGAAGTATTGATGGGAAGTAAAAATGGATTCTTGACTAAAAGGTTGAAAAATTATTCAACAGATCGCAACAACCCGTGTAAACCAACTGCACTTTCCGGTTTATCTCCTTATTTGCATTTTGGACTGATATCTGCTCAAAGATGTGCTTTAGAAGCACGTAAGCTACGAGTTTCACATCCTCAGGCGGTTGATGCTTTCTTGGAAGAGTTGATTGTGCGGAGAGAACTTGCTGATAACTTTTGCTTCTATCAACCTCATTATGATTCATTACAAGGAGCATGGGAGTGGGCTCGGAAGACTTTACTCGATCATGCCTCTGATAAGCGACAACATAATTACACAAGGGAGCAATTGGAGAAGGCACAGACTGCTGATCGCCTCTGGAATGCTTCTCAACTGGAGATGGTTCACTATGGTAAAATGCATGGTTTTATGCGAATGTATTGGGCAAAGAAGATACTGGAATGGACAAGTGGACCTGAAGAAGCCCTTGAGATATGTATATATTTAAATAACAAGTATGAAATGGATGGGAGGGATCCAAGTGGTTATGTTGGCTGTATGTGGTCTATATGTGGTGTACATGATCAGGGTTGGCGAGAGCGTCCTGTTTTTGGGAAAATCCGATACATGAATTATGAAGGATGCAAAAGAAAATTTGATGTTGACAGATACATTGCATATGTTAATAAAATAGTTGGTGATGTCAGGAAGAGAAAGGCAGAGAACTTGCTGTCTCAAAAGGAGAAAGTACTCCGCAGTTGCAATCCTGACGATTGA 1491 0.4225 MASSPSPAMSVNPGRIRTLKEGSGKTGPVVYWMFRDQRLKDNWALIHAVHQANKSNVPVAVVFNLFDHFIGAKSRHFGFMLKGLRQLSHQLQHTLQIPFFLFRGEAEETVSKFVRECGASLLVTDMSPLREMKKCKAEICEKVSDLVTVHEVDAHNVVPLWVASDKLEYSARTIRGKINKKLSEYLVDFPNIEPPNTKWVISEDHYIDWDGIIAQVLRNGAEVPEVDWCEPGEIAAMEVLMGSKNGFLTKRLKNYSTDRNNPCKPTALSGLSPYLHFGLISAQRCALEARKLRVSHPQAVDAFLEELIVRRELADNFCFYQPHYDSLQGAWEWARKTLLDHASDKRQHNYTREQLEKAQTADRLWNASQLEMVHYGKMHGFMRMYWAKKILEWTSGPEEALEICIYLNNKYEMDGRDPSGYVGCMWSICGVHDQGWRERPVFGKIRYMNYEGCKRKFDVDRYIAYVNKIVGDVRKRKAENLLSQKEKVLRSCNPDD 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00274 496 Gene3D - 155 326 - -
Car08g00274 496 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 220 464 IPR036134 -
Car08g00274 496 ProSitePatterns DNA photolyases class 2 signature 2. 430 449 IPR032673 -
Car08g00274 496 Gene3D HUPs 9 154 IPR014729 -
Car08g00274 496 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 27 160 IPR006050 -
Car08g00274 496 PANTHER DEOXYRIBODIPYRIMIDINE PHOTOLYASE 8 490 - -
Car08g00274 496 ProSitePatterns DNA photolyases class 2 signature 1. 303 317 IPR032673 -
Car08g00274 496 MobiDBLite consensus disorder prediction 1 21 - -
Car08g00274 496 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 327 477 - -
Car08g00274 496 TIGRFAM phr2: deoxyribodipyrimidine photolyase 10 465 IPR008148 GO:0003904|GO:0006281
Car08g00274 496 Pfam DNA photolyase 29 191 IPR006050 -
Car08g00274 496 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 28 199 IPR036155 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00274 K01669 - gmx:100170749 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00274 08 2177133 2180557 Car08g00274 08 2177133 2180557 ECH