Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00270 ATGGAGTGGCCTGCTTCTACGGATGAATACGAAAAGCTCTTAATACGGATGAGTACCCCTAGGGTTGTTATTGATAATGCCGTTTGCTCCACTGCGACATTAGTCAAGGTTGATAGCGCAAGAAGGCATGGTAGTTTACTGGATGCAATACAAGTGCTAATTGATCTGAACCTTTTAATCAAGAAAGCATATATATCCTCTGATGGCAAGTGGTTCATGAATGTTTTCCATGTCACTCATCAAAACGGAGACAAGCTAATGGACGAGAGCATTTTAAAATATATAGAACAGTCGCTTGGGAGCATTCACAATGCGACAACGAATCGCTCAAAAGGTCTCCCCGTGCTTGAATTAACAGGAACTGATAGAGTTGGTCTTCTATCAGAGGTTTTTGCTGTACTCGCTGATCTTCAATGTGATGTGGTTGAGGCTAAGGTTTGGACTCACAATGGCCGAATTGCCTCTTTAATCTTTGTAAAAGACTGCAATTCAGGAACCACTATTGAGGACTCTCAGAAAATTAATAAGATTGAAGTGCTTTTAAGAAATGTTTTGAAGGGAGACAATGATATTAGAAGTGCAAAAACTTCTGTCTCAATGTCTGTCATGCACACTGAACGAAGGCTGCATCAAATGATGTTCGCCGATCGTGACTATGAGAGGACTCCCATTCTCAAGTTTACTTCTGATAACACTATAGTGACAGTTCAAAATTGGGTAGAAAGAGATTACACAGTTGTGAATGTTCAATGCAAGGATCGAATCAAACTATTATTTGATGTTGTATGCAATTTGACAGACATGGAGTATGTTGTGTTTCATGCAACTATCAACACAAATAGTAACCGAGCATACTTGGAGTTTTACATAAGACACAAGGATGGCACGCTAATTAGTTCAGAACCAGAGCGACAACGTGTAATTCAATGTTTAAAAGCTTCCGTGGAGAGAAGGGCATCTGAGGGTATTCAACTAGAGTTACGCACAGAAGACAAACAAGGGCTTCTAGCAGAAGTGATGAGAACCTTCAGAGAGAATGGGCTTAATGTTACAAGGGCTGAGATATCCACCATAGGAAACATGGCTACAAATGTTTTCTATGTAACAGATGTGGTTGGAAATCCAGCTGATCCGAAAATCATAGAGTCTGTTCGGCAGAAAATTGGGTCTAGCAATTTAGAAGTGAAGGAGTTACCATTGATATATAATCAGAAGGCAGAGAGTCAGGATCAAGCTATTGGAGTTGGTGGGGCAGTGTTGTGGTCTATTGGTAATCTTGTGAGAAGGAATTTGTATAGTTTGGGATTAATTAAATCATGTTCTTAA 1326 0.3989 MEWPASTDEYEKLLIRMSTPRVVIDNAVCSTATLVKVDSARRHGSLLDAIQVLIDLNLLIKKAYISSDGKWFMNVFHVTHQNGDKLMDESILKYIEQSLGSIHNATTNRSKGLPVLELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIFVKDCNSGTTIEDSQKINKIEVLLRNVLKGDNDIRSAKTSVSMSVMHTERRLHQMMFADRDYERTPILKFTSDNTIVTVQNWVERDYTVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNRAYLEFYIRHKDGTLISSEPERQRVIQCLKASVERRASEGIQLELRTEDKQGLLAEVMRTFRENGLNVTRAEISTIGNMATNVFYVTDVVGNPADPKIIESVRQKIGSSNLEVKELPLIYNQKAESQDQAIGVGGAVLWSIGNLVRRNLYSLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00270 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Car08g00270 441 ProSiteProfiles ACT domain profile. 115 192 IPR002912 -
Car08g00270 441 SUPERFAMILY ACT-like 113 170 IPR045865 -
Car08g00270 441 CDD ACT_ACR_3 244 318 - -
Car08g00270 441 SUPERFAMILY ACT-like 242 299 IPR045865 -
Car08g00270 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Car08g00270 441 CDD ACT_ACR_4 322 393 - -
Car08g00270 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Car08g00270 441 Gene3D - 114 185 - -
Car08g00270 441 SUPERFAMILY ACT-like 320 390 IPR045865 -
Car08g00270 441 Pfam ACT domain 116 163 IPR002912 -
Car08g00270 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00270 Car-Chr8 2162120 2165442 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00270 - - gmx:100806283 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00270 08 2162120 2165442 Car08g00270 08 2162120 2165442 ECH