Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00269 ATGTCATCAACATGTAAATTACAAGACAACAACCTTAGCTCAAACCATAAAACTAACAAACCACTTTCACCTCCTCCATTGTTACAAACTAAAAAATGCGAATGGAATCCGGTGAAGACTATGTTATCAGAGGAGCTAAGAGTTCAAGGAAGATTAGCACTTCCAATGGTTGTAATGAACTTAGCTTGGTTTGCCAAAACAGCTATCACAACAGCATTTTTGGGTCGGCTTGGGGAGCTTAGCTTAGCTGGTGGCGCACTCGGCTTCACTTTTTCTAATGTTACCGGCTTCTCTGTCTTGAATGGTCTTTGTGGTGCCATGGAACCTATTTGTGGACAAGCTCATGGTGCTAAAAACGTGAAGCTTCTTCATAAGACACTTCTCATGACAATACTTTTGTTGTTATTGGTAACAATTCCTATTACTTTCATGTGGCTTCATATTGATAAAATTTTGATTCATTTTGGACAACAACAAGACATTTCAACTGTGGCTGGAACCTATGTTTATTATCTCATACCTGATTTGTTTGTTATCTCACTTTTGTGTCCCTTAAAAGCTTACTTGAGCTCTCAAAGCATCACTCTTCCTACCATGTTTAGTTCTGGTGTAGCACTTGCTTTTCATGTTCCTGTTAATATAATACTCTCAAAAACCATGGGTCTAAGAGGGGTTTCCATGGCTGTTTGGATAACTGATCTTATTGTTGTGGTTCTTCTGGCCATTTATGTTGTCACTTTGGAGAATCAAAAGGTAACGGCGTGGAAGGAAGGAGGGTGGTGGGATCAGAGTGTTATGGATTGGATTAGGCTAATCAAGCTTTGTGGAACTTGTTGTCTCAACACATGTATGGAGTGGTGGTGCTATGAGATTCTAGTCTTGCTTACTGGCCACTTGACAAACGCTAAGCAAGCGCTAGGAGTTTTAGCGATTGTGTTAAACTTCGATTATTTGCTTTTCTCAGTGATGTTGTCGTTGGCCACTTGTGTTTCCACCCGTGTCTCTAATGAGCTTGGTGCCAACGAACCTGGCCGTGCTTACCGGTCAGCGTGTGTGTCTCTAGCGTTGGGTTTTATCGCAGGTTGCACTGGCAGCTTGGTGATGGTGGCTGCAAGGGGAATTTGGGGGCAACTTTTCAGCCATGATAGAGGAATTGTAAATGGAGTAAAAAAGACAATGTTGTTGATGGCTCTAGTGGAATTGTTTAATTTTCCATTGGCAGTTTGTGGAGGGATAGTTCGAGGGACGGCTAGACCCTGGTTGGGTATGTATGCCAATTTGGGTGGATTTTATTTCCTGGCACTGCCCCTTGGTGTTGTTTTTGCCTTCAAACTTCGTCTTGGCCTAGTTGGACTCTTCTTTGGACTTTTAACTGGTATTGTTGCTTGCTTGTCACTATTATTAGTATTTATTGCTAGGATAAAGTGGGTGGAAGAAGCTGCCAAGGCACAAAGACTAGCCAGTAACGACCAAGTTAAAGGAGTTCCCTATAATGATGCAGAAATACATGGTGAGGCTCGTGAAAATAACAAAGTATAA 1539 0.4178 MSSTCKLQDNNLSSNHKTNKPLSPPPLLQTKKCEWNPVKTMLSEELRVQGRLALPMVVMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFSNVTGFSVLNGLCGAMEPICGQAHGAKNVKLLHKTLLMTILLLLLVTIPITFMWLHIDKILIHFGQQQDISTVAGTYVYYLIPDLFVISLLCPLKAYLSSQSITLPTMFSSGVALAFHVPVNIILSKTMGLRGVSMAVWITDLIVVVLLAIYVVTLENQKVTAWKEGGWWDQSVMDWIRLIKLCGTCCLNTCMEWWCYEILVLLTGHLTNAKQALGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANEPGRAYRSACVSLALGFIAGCTGSLVMVAARGIWGQLFSHDRGIVNGVKKTMLLMALVELFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGVVFAFKLRLGLVGLFFGLLTGIVACLSLLLVFIARIKWVEEAAKAQRLASNDQVKGVPYNDAEIHGEARENNKV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00269 512 TIGRFAM matE: MATE efflux family protein 55 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g00269 512 PANTHER PROTEIN DETOXIFICATION 56 35 492 - -
Car08g00269 512 MobiDBLite consensus disorder prediction 1 25 - -
Car08g00269 512 Pfam MatE 55 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g00269 512 Pfam MatE 279 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g00269 512 CDD MATE_eukaryotic 45 482 IPR045069 GO:0042910|GO:1990961
Car08g00269 512 MobiDBLite consensus disorder prediction 1 27 - -
Car08g00269 512 PANTHER MULTIDRUG RESISTANCE PROTEIN 35 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00269 Car-Chr8 2148795 2150333 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00269 K03327 - gmx:100804083 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00269 08 2148795 2150333 Car08g00269 08 2148795 2150333 ECH