Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00255 ATGTCTTCTAATAGTGTGAAGGAAAGTGCATCAGTTGCTGAACGGAAGCATGACTTTGGAAATTCATATGACCTAGAGAGCTCCAGTGACAAGTATGATGAAGACATTAATCCAACTAGGGCAGATAAAGTGCGACATTCTTACTGTCAGATAGGGCATCCAAGTGGAACTGGAATGGGAAAATTGTATAATGTAAAATACTTCATCATTAAGAGTTTGAACCATCAAAATATTCGTTTGTCAATTGAGAAGGGAATTTGGGCTACTCAAACCATGAATGAACCCATTCTGGAAGAAGCTTTTCATAATTCAGGTAGTGTAATCCTTATATTTAGTGTCAACATGAGTGGCTGCTTCCAAGGGTACGCACAAATGCTGTCCTCTATTGGGTGGAGGAGAGACAATGTTTGGAGTGATGGAAGTGGTAAAAGTAAACCTTGGGGTCGCACTTTTAAGGTCAAATGGCTGTGCTTGAATGACTTGCCTTTCCATAAGACTCTTCATCTCAAGAATCCACTGAATGAATATAAACCTGTCAAAATTAGCAGAGATTGCCAGGAGTTATCTCCAGATATTGGTCTAGCTCTTTGTGAACTCCTTGATTGTAACAATGATGTGGATGGACTTGCAAGTTCATCAAGGAACAATTTTTCTTCGGAGGGTCATTCTGCTAATACTCCAAGTGCAATGGGAGATCAAGACTGTAACTTTCCTTCGCCGCAGTTGTCATGGTCAATGCCTATGGCTTATTCTTCCATATTTTCCCAAAATCAAGCTGAAGGTAATAAATTTCATTCAACCAACCAGAAATTCAGTGGAAGAATGTTCACTGAAATACCGCCCATCACTTTTAAGTCATCAAAAGTGGCAGGTATTAAACGTTCTCATTTTAGTGGGCGTACTCCGACGATACTAATGGAGAAGGATGTGGCTTCACAATTTGATGAATGGGGTCTGTTTTCAGAATGCCCTTTAGCTAGTTCCCTAACTGATGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGATCCAtagcagatgcaggaaacagttacgtagcagtagcagtGCAACTAAACGATATCAGAAACAGCTAGAATCGTTGGGAAGTAACACACACGATGATGATAGGTGA 1140 0.3868 MSSNSVKESASVAERKHDFGNSYDLESSSDKYDEDINPTRADKVRHSYCQIGHPSGTGMGKLYNVKYFIIKSLNHQNIRLSIEKGIWATQTMNEPILEEAFHNSGSVILIFSVNMSGCFQGYAQMLSSIGWRRDNVWSDGSGKSKPWGRTFKVKWLCLNDLPFHKTLHLKNPLNEYKPVKISRDCQELSPDIGLALCELLDCNNDVDGLASSSRNNFSSEGHSANTPSAMGDQDCNFPSPQLSWSMPMAYSSIFSQNQAEGNKFHSTNQKFSGRMFTEIPPITFKSSKVAGIKRSHFSGRTPTILMEKDVASQFDEWGLFSECPLASSLTDDDFLDMSYEEYLEIHSRCRKQLRSSSSATKRYQKQLESLGSNTHDDDR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00255 379 Pfam YT521-B-like domain 66 200 IPR007275 GO:0003723
Car08g00255 379 MobiDBLite consensus disorder prediction 10 36 - -
Car08g00255 379 MobiDBLite consensus disorder prediction 353 370 - -
Car08g00255 379 MobiDBLite consensus disorder prediction 1 36 - -
Car08g00255 379 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 4 315 - -
Car08g00255 379 MobiDBLite consensus disorder prediction 353 379 - -
Car08g00255 379 ProSiteProfiles YTH domain profile. 65 200 IPR007275 GO:0003723
Car08g00255 379 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 4 315 IPR045168 -
Car08g00255 379 MobiDBLite consensus disorder prediction 213 232 - -
Car08g00255 379 Gene3D ph1033 like domains 59 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00255 Car-Chr8 2061096 2064648 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00255 K20100 - gmx:100784130 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00255 08 2061096 2064648 Car08g00255 08 2061096 2064648 ECH