Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00254 ATGGGAACAATGTTGGTTCAAAGAGTTGAAAGCTTATCCTTAAGTGGGATAGAATCAATTCCAAAGGAATACGTGAGGCCAAAAGAAGAGTTAACAAACATAGGTAACATCTTCGAGGAAGAAAAAAAAGAAGGGCCTGAAGTTCCAACAATTGATTTAAAAGAAATAAACTCTTCGGATGAATTAGTTAGAAGGAAATGTAGGGAGAAGTTGAAGAAAGCAGCTGAAGAATGGGGTGTGATGCATTTAGTGAACCATGGTATATCTCATGATCTAATTAATCGTCTTAAGAAAGTTGGTGAAACATTCTTTGGTTTGTCTGTTGATGAAAAGGAGAAATATGCAAATGATCAAAGTTGTGGTAAGATTCAAGGTTATGGAAGTAAATTAGCTAATAATGCTAGTGGTCAACTTGAATGGGAAGATTACTTCTTTCATCTTATTTTTCCTGAGGATAAGAGGGACTTGTCCATCTGGCCTAAGACACCACATGATTATACGGAGGTTACAAGCGAATATGCAAAGCAACTAAGAGGGCTAGCTAGCAAGATAATGGAAGTGTTGTCTCTAGAACTAGGGCTAGAAGGAGGAAGGTTAGAAAAGGAAGTTGGTGGAATGGAAGAGCTTTTACTTCAAATGAAAATAAACTATTACCCAATTTGCCCTCAGCCAGAACTAGCACTTGGAGTTGAAGCCCATACAGATGTAAGTTCACTTACTTTCCTTCTACACAATATGGTGCCAGGTTTGCAACTTTTCTATGAGGGTAAATGGGTCACAGCAAAATGTGTACCTGATTCAATTCTAATGCATATTGGTGACACAATTGAAATTCTTAGCAATGGAAAATACAAGAGTATACTTCACCGTGGATTGGTGAATAAGGAAAAAGTTAGAATATCTTGGGCAGTGTTTTGTGAACCACCTAAGGAAAAAATCATCCTCAAGCCACTTCCTCAACTTGTAACTCAAAATCAACCTGCACGGTTTCCACCACGCACTTTTGCTCAGCATATTCATCACAAACTTTTTAGGAATGAGGAAGAGGAAGATACCAAATGA 1062 0.3776 MGTMLVQRVESLSLSGIESIPKEYVRPKEELTNIGNIFEEEKKEGPEVPTIDLKEINSSDELVRRKCREKLKKAAEEWGVMHLVNHGISHDLINRLKKVGETFFGLSVDEKEKYANDQSCGKIQGYGSKLANNASGQLEWEDYFFHLIFPEDKRDLSIWPKTPHDYTEVTSEYAKQLRGLASKIMEVLSLELGLEGGRLEKEVGGMEELLLQMKINYYPICPQPELALGVEAHTDVSSLTFLLHNMVPGLQLFYEGKWVTAKCVPDSILMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPQLVTQNQPARFPPRTFAQHIHHKLFRNEEEEDTK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00254 353 Gene3D - 4 351 IPR027443 -
Car08g00254 353 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 308 IPR005123 -
Car08g00254 353 Coils Coil 346 353 - -
Car08g00254 353 Pfam 2OG-Fe(II) oxygenase superfamily 212 308 IPR044861 -
Car08g00254 353 Pfam non-haem dioxygenase in morphine synthesis N-terminal 48 161 IPR026992 -
Car08g00254 353 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 349 - -
Car08g00254 353 SUPERFAMILY Clavaminate synthase-like 6 346 - -
Car08g00254 353 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00254 Car-Chr8 2059120 2060548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00254 9 338 Glycosyltransferase AT5G59530 28.994 3.13e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00254 K05277 - gmx:547615 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00254 08 2059120 2060548 Car08g00254 08 2059120 2060548 ECH