Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00245 ATGGATGTTTGGTTGTGGAGGCTTATTCTTCTTTCTCTTGTTGGGATTCTCTTTTGTCCTAAACATTGTGTATCTCAAAAAGATACAGGTAGAAAATACACGTTTATGCAGAATGCAACATCAGCAGCAAACATATCATACTACGATTACATCATAATTGGTGGAGGAACCGCAGGGTGTCCTTTAGCTGCAACACTGTCACAAAACTACAGCGTTTTGGTACTTGAGCGTGGTGGATCACCTTATGGTAACCCAAATATAACTAATTTAAGTGCTTTTGGTGTGCCACTCTCTGATACTTCTCCTTCATCTCCTGCTCAACGCTTCGTCTCTGAAGATGGTGTCATTAACTCAAGAGCTCGTGTCCTTGGTGGTGGAAGCTGCTTGAACGCTGGCTTCTACACTCGCGCAAGCCCTCACTACATAGGGGAAGCTGGTTGGGATGGAAGGTTAGTGAATGAGTCATATAAATGGGTGGAGCGAGTGGTGGCATTCAAGCCTCCAATGCGGCAATGGCAATCAGCAGTTAGAGATGGATTGATGGAAATAGGGATATTGCCTTACAATGGATTTACTTATGATCATGTTTATGGTACTAAGGTTGGAGGTACAATCTTTGACCAAAATGGTCACAGACACACTGCAGCTGATCTTTTGGAATATGCTAACACAAACAAAATTACTATTCTTTTGCATGCCACCGTTCATAGGATCTTGTTTACAACAAAGAAAGTTGCAGATGGAGTTATATTTATGGATGCACATGGTTTAGAACACAGGGCATATCTGAAACAGGGGAGTAGGAATGAGATAATAGTATCAGCAGGTGCATTAGGTAGTCCACAACTTTTGATGTTGAGTGGAATTGGAGCAGAAAATGACCTTAGAAAACACAATATCAATGTAGTATTGGATCAACCTTTGGTAGGACAAGGAATGTCAGATAATCCCATGAATGCTGTTTTTGTCCCGTCTCCTGCTCCTGTAGAGGTCTCTCTTATTCAGGTAGTTGGCATTACCAACTTCGGCAGCTACATCGAAGCTGCCAGTGGTGAAAACTTTGGTGGTGGTTCTACTCCAAGAGACTTTGGAATGTTTTCTCCTAAGATTGGTCAATTCTCAAAGTTGCCTCCAAAGCAAAGGACCCCAGAAGCCCTAGCAAAAGCAATAGAAAGAATGGAGAGTCTAGAGCAAGAAGCTTTCAAAGGTGGATTCATTCTAGAAAAAATAATGGGCCCAATTTCAACGGGCCATTTGGAGCTCCAAAACACTGACCCAAATGAGAACCCTTTAGTGACCTTTAATTACTTCAAGGATCCAAGAGACTTAGAAAGATGCATTCAAGGCATTAGTACCATTGAAAAAATAATTGATTCCAAGGCTTTTTCTCCATTTAAATACAATAACATGCCAGTCTCTATGTTACTTAACATGACTGCAAATTCACCAGTTAATTTATTGCCTAAACACACCAATACTTCATTGTCTTTGGAACAGTTTTGTAGAGACACTGTGATGACTATATGGCACTATCATGGTGGATGTCAAGTTGGTAGGGTTGTTAATAGTGATTACAAGGTTCTTGGTGTAGATGCGTTGCGTGTAATCGATGGTTCTACGTTTAATTATTCTCCTGGAACTAATCCTCAAGCCACTCTTATGATGCTTGGAAGGTATATGGGAGTAAAAATATTGAGAGAGAGACTTGCAGCCAAAGAAACCAAATAA 1728 0.4074 MDVWLWRLILLSLVGILFCPKHCVSQKDTGRKYTFMQNATSAANISYYDYIIIGGGTAGCPLAATLSQNYSVLVLERGGSPYGNPNITNLSAFGVPLSDTSPSSPAQRFVSEDGVINSRARVLGGGSCLNAGFYTRASPHYIGEAGWDGRLVNESYKWVERVVAFKPPMRQWQSAVRDGLMEIGILPYNGFTYDHVYGTKVGGTIFDQNGHRHTAADLLEYANTNKITILLHATVHRILFTTKKVADGVIFMDAHGLEHRAYLKQGSRNEIIVSAGALGSPQLLMLSGIGAENDLRKHNINVVLDQPLVGQGMSDNPMNAVFVPSPAPVEVSLIQVVGITNFGSYIEAASGENFGGGSTPRDFGMFSPKIGQFSKLPPKQRTPEALAKAIERMESLEQEAFKGGFILEKIMGPISTGHLELQNTDPNENPLVTFNYFKDPRDLERCIQGISTIEKIIDSKAFSPFKYNNMPVSMLLNMTANSPVNLLPKHTNTSLSLEQFCRDTVMTIWHYHGGCQVGRVVNSDYKVLGVDALRVIDGSTFNYSPGTNPQATLMMLGRYMGVKILRERLAAKETK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00245 575 SUPERFAMILY FAD/NAD(P)-binding domain 47 567 IPR036188 -
Car08g00245 575 Coils Coil 379 399 - -
Car08g00245 575 SUPERFAMILY FAD-linked reductases, C-terminal domain 313 514 - -
Car08g00245 575 Pfam GMC oxidoreductase 48 317 IPR000172 GO:0016614|GO:0050660
Car08g00245 575 Gene3D - 48 557 IPR036188 -
Car08g00245 575 ProSitePatterns GMC oxidoreductases signature 2. 276 290 IPR000172 GO:0016614|GO:0050660
Car08g00245 575 Gene3D - 165 507 - -
Car08g00245 575 PANTHER OSJNBA0019K04.7 PROTEIN 17 570 - -
Car08g00245 575 Pfam GMC oxidoreductase 413 558 IPR007867 GO:0016614
Car08g00245 575 PIRSF Alcohol_oxidase 24 575 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00245 Car-Chr8 1985389 1988608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00245 3 568 Miscellaneous Gene Families AT5G51950 57.491 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00245 - - gmx:100777238 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00245 08 1985389 1988608 Car08g00245 08 1985389 1988608 ECH