Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00243 ATGATGAGAGGTTCAAAGCGTTTGGCTGTTTCCGAACCCAATCATACTGATACTAACGAAACGCCCTTTAAGAATAAAAGAATAATGGAAGGATCTCTCTTTGATGTCCATAGGGCTGAACCATCTCAACAACTGATGGTGTCGACACCCCAATTGGATATGAAACGTGCAGAGTCATCCCAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGGTTCAAACACAATTAAAGAATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTACAAGCATTATGGAAAAATTTAGTGATGTTGTCAACTGGCTCAAAGCAAATGCCACCAAGGCACAAAATTCGGCTCCTGATGCTGGTGCTTCTTTTGGTGTGAAAAAGTTTTCGCCTGAAGTAGCCAACAAAGAAAATAGTTTTTTTGGAGAAAAAACTGGATCCACTACTGTTAGTACTGTTACAAATTTTGCTAGTTCATGGAACCCTGGACTATTTTCAAACAATCAAAACGTGTATGCATTTGGAAATCAAAATTCAGCTCCCAACAATCACACTCCCTCCAATCACAATGCTTCAGATGATGTGGATGCTGAAAATGAAGTGGAGCAGCCCAGCAGCCCATCAGTGAAGAAATCAGAAGAGAAAGGTGTAGTAGTTGTACATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGACCCAACAGATAAAGATGTATGGAAAGATAGAGGAATGGGCCAGCTGTCCATTAAATGCAAAGAGGGGGTCGCCAAGGCTACCAAAGAGTCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAATTCTTCTTAATGCCTTGTTATATCCTGGAATCAAGACAAATCTACAGAAGAACTCTCTTGTTACGATATTTCATACTTCGGGTAATGCTGATGGTAGTGGTGGAGATAATGATAGTGTTGTTGCACGTACATTTTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACTATTGAAGAATATGCTCCAGTATCTTGA 1053 0.4017 MMRGSKRLAVSEPNHTDTNETPFKNKRIMEGSLFDVHRAEPSQQLMVSTPQLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHATSIMEKFSDVVNWLKANATKAQNSAPDAGASFGVKKFSPEVANKENSFFGEKTGSTTVSTVTNFASSWNPGLFSNNQNVYAFGNQNSAPNNHTPSNHNASDDVDAENEVEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPTDKDVWKDRGMGQLSIKCKEGVAKATKESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSLVTIFHTSGNADGSGGDNDSVVARTFLIRMKTEDDRNKLASTIEEYAPVS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00243 350 Pfam RanBP1 domain 215 345 IPR000156 GO:0046907
Car08g00243 350 SUPERFAMILY PH domain-like 217 347 - -
Car08g00243 350 ProSiteProfiles Ran binding domain type 1 profile. 202 345 IPR000156 GO:0046907
Car08g00243 350 PANTHER RAN BINDING PROTEIN 6 348 IPR045255 -
Car08g00243 350 SMART ranbd_3 207 346 IPR000156 GO:0046907
Car08g00243 350 MobiDBLite consensus disorder prediction 178 220 - -
Car08g00243 350 Gene3D - 127 349 IPR011993 -
Car08g00243 350 CDD RanBD_NUP50 219 347 - -
Car08g00243 350 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 6 348 - -
Car08g00243 350 MobiDBLite consensus disorder prediction 1 23 - -
Car08g00243 350 MobiDBLite consensus disorder prediction 178 196 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00243 K14295 - gmx:100816975 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00243 08 1956055 1962312 Car08g00243 08 1956055 1962312 ECH