Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00240 ATGTGCCAGTTATCATCAACCTCTGTCTCCACTTTGTGTGAAAGCAATAAAAACCAGCCAAATATATCCACAACCAAATTACACAAAACTTTACCTGACATGTTTACTCCATTGATCCCCAAATCCCCAACATTCAAACAACAACATAAAAAATCCCATTTTTCTTTGGCTCTCAATGAAGCAAAATACATAGCAAACATAGCATTACCTATGGTTTTAACTGGTTTATTACTTTATTCACGTTCCATTATTTCAATGTTGTTTCTTGGTCGTGTTGGTGAACTTGCTTTAGCTGGTGGATCACTTGCAATTGGTTTTGCAAACATCACTGGTTACTCTATTCTCTCTGGTCTTGCCATGGGAATGGAACCTATTTGTGGTCAAGCTTTTGGTGCCAAAAGATTCAAACTTCTCGGCTTAACGATGCAGAGAACAACGATTCTTCTTCTTGTAACTTCAATTTTCATTTCATTCCTATGGCTTAACATGAAAAAGATTTTGATTTTTTGTGGTCAACAAGAAGATATAGCAAACGTGGCTCAAAGTTACATTATTTATTCTCTTCCTGATCTTATAGCACAATCTTTGTTACACCCTTTGAGAATCTATCTTCGAAGCCAATCCATAACACTTCCTCTTACATATAGTGCCACTCTTTCAATTCTTCTACATGTTCCTATAAACTATTACCTTGTTTCTGTGTTAAAGTTAGGAATCAAAGGCATTGCTTTAGGCGCTGTTTGGACGAATTTCAACCTCGTAGTTTCGTTGATTATCTATATTTGGGTTTCTGGAACACACAAGAAAACATGGCCTGGTTTTTCATCAGCTTGTTTCAAAAGATGGAAACCTCTTTTGAATTTGGCAATTCCAAGCTGCATTTCGGTTTGTCTTGAATGGTGGTGGTACGAAATCATGATTTTACTTTGTGGGCTGTTGATTAATCCTCAAGCAACTGTTGCATCAATGGGGATTTTGATTCAAACAACTGCATTGATATACATTTTTCCTTCTTCTTTGAGTTTCGGGGTTTCGACAAGAGTTGGGAATGAACTTGGTGCTGAAAATCCACAAAGAGCAAAACTTGCAGCATTAGTTGGACTCTGTTTCAGTTTCTTTTTAGGATTCTTTGCTTTGTTTTTCGCTATTTCGGTTCGAAATATTTGGGCTTCAATGTTCACAAATGATGTTGAAATAATAGCTTTAACTTCAATGGTGTTACCTATTATTGGACTTTGTGAGCTTGGAAATTGTCCACAAACAACGGTTTGTGGTGTTTTGAGGGGTACAGCGAGGCCAAAGTTGGGTGCAAATATCAATTTGGGTTGTTTTTATCTTGTAGGAATGCCAGTTGCTGTTTGGTTGAGTTTCTTTGCAGGGTTTGATTTCAAAGGTTTGTGGTTTGGTCTTTTGGCTGCACAAGGTTCGTGTATGTTGACTATGTTGTTTGTTTTGTTTCGAACAAATTGGGAATGTCAAGTACAAAGAGCTAAGGAGCTTACATCATCAGATCCAAGTgaagaagaagaagaagaagaTAAATTCTTTGTTAGTTCATGTGACACAAAACTGTGCTCTGATTCATTAGTTTGA 1593 0.3647 MCQLSSTSVSTLCESNKNQPNISTTKLHKTLPDMFTPLIPKSPTFKQQHKKSHFSLALNEAKYIANIALPMVLTGLLLYSRSIISMLFLGRVGELALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLTMQRTTILLLVTSIFISFLWLNMKKILIFCGQQEDIANVAQSYIIYSLPDLIAQSLLHPLRIYLRSQSITLPLTYSATLSILLHVPINYYLVSVLKLGIKGIALGAVWTNFNLVVSLIIYIWVSGTHKKTWPGFSSACFKRWKPLLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGILIQTTALIYIFPSSLSFGVSTRVGNELGAENPQRAKLAALVGLCFSFFLGFFALFFAISVRNIWASMFTNDVEIIALTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFFAGFDFKGLWFGLLAAQGSCMLTMLFVLFRTNWECQVQRAKELTSSDPSEEEEEEDKFFVSSCDTKLCSDSLV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00240 530 PANTHER MULTIDRUG RESISTANCE PROTEIN 50 506 - -
Car08g00240 530 TIGRFAM matE: MATE efflux family protein 70 467 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g00240 530 CDD MATE_eukaryotic 60 496 IPR045069 GO:0042910|GO:1990961
Car08g00240 530 Pfam MatE 291 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g00240 530 Pfam MatE 70 229 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car08g00240 530 PANTHER PROTEIN DETOXIFICATION 49 50 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00240 Car-Chr8 1917123 1919223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00240 K03327 - gmx:100811560 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00240 08 1917123 1919223 Car08g00240 08 1917123 1919223 ECH