Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00225 ATGAACAACTTAAAGTTAGGTGTAGATGTGGTTAGTGCTCACAATCTACTACCTAAAGATGGCGAAGGTTCTTCTAATTCCTTTGTTGAACTTTACTTTGATGGCCAAAAGTACCGCACAACCATCAAAGAAAGGGATCTTAATCCTGTTTGGAATGAGAGTTTCTACTTCAATATATCAGATCCTTCCAACCTTCACTATCTCCCTCTTGATGTTTATGTCCATTGTCATTCCAAAGCTACTAACTCAACTTCATTTCTTGGCAAAGTTAGTCTCACTGGTACTTCTTTTGTCCCTCATTCTGATGCTGTTGTATTGCATTTTCCATTGGAAAAGCGCGGCATTTTCTCGCGTGTTAGAGGAGAGATTGGCCTTAAAGTTTACATCACTAATGATCATACCATAAAGTCCTCAATTCCAACTACTAATGTTGATTCAATGCATACAAATAATAATCTTAGCTCAACACATGGTGAAGTTCATGGAACTACAAATGCAATGATGAATGGTTTGTCTAGTGACAAGGTTGAGTCGTCGAGACATACATTTCATCACCTCCCAAACACGAACAATCATCGGCATCAACATCAACAACATTCTACTGGCTATGCAGATACTCACTATGTAACAAAGTATGAAGCTGATGAAATGAAGTCTGATCAACCACAGCCTATGAAACTAGTACATTTGCACTCTGCTACATCAATGCAACCAATCGATTTTGCACTTAAAGAAACTAGTCCATTTCTTGGTGGTGGAAGAGTTGTTGGAGGACGCGTTGTTCATAAAGACAAGTCTTCAAGTACTTATGATCTTGTGGAAAGGATGTATTTTTTGTATGTTAGAGTCGTTAAGGCTCGCGAGCTTCCTTCAATGGATGTTACAGGAAGTCTTGATCCATTTGTTGAGGTGAGAATTGGAAATTATAGAGGCATTACAAAACACTTTGATAAGAATCAGAATCCTGAGTGGCATCAAGTGTTTGCATTTTCAAAGGAGAGGATGCAAGCATCTGTACTAGAAGTTGTGATCAAGGACAAAGATCTTATCAAAGATGATTTTGTTGGGATTGTGAGGTTTGACATCAATGAGGTTCCTTTAAGAGTTCCACCAGATAGTCCTTTGGCACCTGAATGGTACCGTCTTGAAGATAAAAAAGGGGAGAAAGTTAAAGGTGAGTTGATGTTAGCTGTTTGGATTGGCACTCAAGCTGATGAAGCTTTTTCTGATGCTTGGCATTCAGATGCAGCTTCACCTGTTGATAGCACACCTGCTACTACCACAGCCATACGTTCAAAGGTTTATCATGCTCCAAGGTTGTGGTATGTTCGTGTCAATGTGGTAGAGGCTCAAGATTTGATTCCAACGGAGAAAAATCGGTTCCCAGATGCTTATGTTAAGGTGCAGATAGGTAACCAAGTGCTGAAAACAAAGACAGTGCCTGCTAGGACTCTAAATCCACAATGGAATGAAGATCTTTTGTTTGTTGCTGCTGAGCCTTTTGAAGATCATATAATACTTTCGGTTGAAGATCGAGTTGGTCCTGGAAAAGATGAGATCATTGGGAGGGTGATCATACCTTTAAACGCGGTGGAGAGGCGAGCTGATGATAGGATCATTCATTCTAGATGGTTCAACTTGGAAAAGCCTGTTGTTGTGGATGTTGATCAGCTGAAGAGAGAAAAATTTGCTAGCAGAATTCAGCTAAGGTTATGTCTTGACGGAGGTTATCATGTTTTTGATGAATCAACTCATTATAGCAGTGATCTTCGCCCCACGGCGAAACAGCTATGGAAGCCAGCTATTGGTATTTTAGAACTTGGAGTGTTGAATGCCATAGGGCTCCATCCAATGAAAACAAGGGATGGTAGAGGCACTTCTGATACATATTGTGTGGCAAAATATGGTCACAAATGGGTCAGAACAAGGACTCTTGTTGATAACTTGTCTCCAAAGTACAATGAGCAATACACTTGGGAGGTTTTTGATCCTTCCACAGTACTCACAGTTGGTGTTTTTGACAATTCTCAAATCAGTGGTGAAAAGGGTCACAACAATAACAGTTCAAAAGACTTGAAAATTGGGAAGGTGAGAATTCGCATATCGACTCTCGAAACAGGAAGGATTTACACTCATTCATATCCTTTGCTTGTTCTTCATCCTACTGGTGTTAAGAAAATGGGTGAACTTCACTTGGCAATAAGATTCTCATGCACTTCTTTCTCAAACATGCTTTACCTATACTCAAGACCACTTCTGCCAAAAATGCACTATGTTAGGCCTTTTGCTGTCATGCAACTCGATATGCTCCGTCACCAAGCAGTTAACATAGTCGCAGCACGGCTCGGCCGAGCCGAGCCCCCCCTCCGTAAAGAAGTGGTGGAATACATGTCAGATGTGGACTCACACTTATGGAGCATGCGTCGTAGCAAGGCGAATTTCTTTCGCCTTATGACAGTTTTTTCGGGTGTTTTTGCAGTTGGAAAATGGTTAGGTGATATATGCATGTGGATAAATCCTATTACAACAGTTCTTGTTCATGTATTGTTTCTTATGTTAGTTTGTTTTCCTGAGTTGATTATGCCAACACTTTTTCTCTACCTGTTCTTGATTGGTGTGTGGAACTTTCGGTACCGACCAAGGTACCCTCCTCACATGAACACAAGAATCTCACAAGCTGATGCAGTACACCCTGATGAAATGGATGAAGAGTTTGATACTTTTCCAACAAGTAAAAACCATGATCTTGTTAGATTAAGGTATGATCGTTTGAGGAGTGTGGCTGGAAGAATACAAAGTGTTGTTGGTGATTTGGCTAGTCAAGGTGAAAGGATTCATGCACTTTTGAGCTGGAGAGATCCAAGAGCTACTGCTATATTCATTACTTTCTGTTTGTTATCTGCTTTGGTTTTGTATGTTACTCCTTTTCAAGTTGTAGCTGGTTTAGCAGGATTCTATTTCATGAGACATCCGAGGTTTCGGTGCAGGCTTCCGTCCGCACCGATCAATTTCTTCCGCCGTCTGCCTGCAAGAACTGATAGCACCAATCCTCATCCCTCTTTTGAAATTCCAACTTCCATAAACAATAATAATACTATTAGCACCTCCATTATTACTACTACAAAAATTGAAGGTGATACTAATAATGCAACAAAGTTTCCAAGTACATCATATATGGTAGTATCTAACAATCATAAAGATGATGAGGCTGCAAATGCTGTTAAAGTCGTTGAGGAATACTTGCAGATTCATCGATCCTGGAAGTCGGATAAAAACTATGGAAATTGTGATGGTAAAGGAATATATGTATATGATTTGCCATCTAAGTTTAATAAGGATTTGGTTGGTCAATGCAATGAAATGGTTCCATGGCAAGGTTTTTGCAAATATATAAGTAATGAAGGGTTTGGTGAACCAATATCAAAACTTGGTAAAGGTTGGTATAAAACTCATCAATACTCACTTGAATTAATTTTTCATTCAAGGGTGTTGAAGCATCCATGTAGGATTTATAATGAAAATGATGCAAAGTTGTTTTATGTTCCATTCTATGGTGGACTTGATGTGTTGAGATGGCATTTCAAGAATGTTTCAAATGATGTTAAAGATAGTTTGGGTTTGGAGTTATTGAAGTGGCTTGAAAGACAAGTTACATGGAAAAGGAATTCAGGTAAGGATCATGTTTTTGTGTTAGGTAAAATTTCATGGGATTTTAGGAGGACTAATGATTCTCCTTGGGGTACTAGGTTGTTAGAGTTTGATAAAATGCAAAATCCAATTAAGTTATTGATTGAACGACAACCGTGGCATGTCAACGACATCGGAATTCCTCATCCGACTTATTTTCATCCGAAATCGGACAAAGATATAATCGACTGGCAACTAAGAATCATAAGATCGAATAGGAAGAATCTTGTGAGTTTTGCTGGTGCGGCACGAGCTGATGCAGACGACCAGATTAGGTCGATATTAATAGACCAATGCAGTTCAAATATTGATGGTAAATGCAAGTTTTTGAATTGTAGTTCTGTTAAATGTTATGAGCCAGAAACAATTATAGACCTTTTTGTGGAGTCTGAGTTTTGTTTGCAGCCACCAGGCGATAGTCCAACTAGAAAATCGGTTTTCGATTCGCTGATATCGGGTTGTATTCCGGTTATATTCGATCCTTTCACAGCTTACTATCAATATCCTTGGCATTTGCCAGAGGATTATGATAAGTATTCTGTGTTTATGGATAAAAAAGAGGTAAGAGAAATGAATGTGAATGTTGTGGAGAGGCTTGCCAATATTTCTTTAAGAGAAAGGGAAAATATGAGGAGGTATATTGTATATGAACTATTGCCTAGTGTAGTATATGGTGATCACAATGCTGAGCTTGAGAAATTTCAAGATGCATTTGCTATTACTATGAATAATTTGCTTGAGAGGGTTAGCAGATTCAAGGATTGA 4452 0.3899 MNNLKLGVDVVSAHNLLPKDGEGSSNSFVELYFDGQKYRTTIKERDLNPVWNESFYFNISDPSNLHYLPLDVYVHCHSKATNSTSFLGKVSLTGTSFVPHSDAVVLHFPLEKRGIFSRVRGEIGLKVYITNDHTIKSSIPTTNVDSMHTNNNLSSTHGEVHGTTNAMMNGLSSDKVESSRHTFHHLPNTNNHRHQHQQHSTGYADTHYVTKYEADEMKSDQPQPMKLVHLHSATSMQPIDFALKETSPFLGGGRVVGGRVVHKDKSSSTYDLVERMYFLYVRVVKARELPSMDVTGSLDPFVEVRIGNYRGITKHFDKNQNPEWHQVFAFSKERMQASVLEVVIKDKDLIKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKVKGELMLAVWIGTQADEAFSDAWHSDAASPVDSTPATTTAIRSKVYHAPRLWYVRVNVVEAQDLIPTEKNRFPDAYVKVQIGNQVLKTKTVPARTLNPQWNEDLLFVAAEPFEDHIILSVEDRVGPGKDEIIGRVIIPLNAVERRADDRIIHSRWFNLEKPVVVDVDQLKREKFASRIQLRLCLDGGYHVFDESTHYSSDLRPTAKQLWKPAIGILELGVLNAIGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTLVDNLSPKYNEQYTWEVFDPSTVLTVGVFDNSQISGEKGHNNNSSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHLAIRFSCTSFSNMLYLYSRPLLPKMHYVRPFAVMQLDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGVFAVGKWLGDICMWINPITTVLVHVLFLMLVCFPELIMPTLFLYLFLIGVWNFRYRPRYPPHMNTRISQADAVHPDEMDEEFDTFPTSKNHDLVRLRYDRLRSVAGRIQSVVGDLASQGERIHALLSWRDPRATAIFITFCLLSALVLYVTPFQVVAGLAGFYFMRHPRFRCRLPSAPINFFRRLPARTDSTNPHPSFEIPTSINNNNTISTSIITTTKIEGDTNNATKFPSTSYMVVSNNHKDDEAANAVKVVEEYLQIHRSWKSDKNYGNCDGKGIYVYDLPSKFNKDLVGQCNEMVPWQGFCKYISNEGFGEPISKLGKGWYKTHQYSLELIFHSRVLKHPCRIYNENDAKLFYVPFYGGLDVLRWHFKNVSNDVKDSLGLELLKWLERQVTWKRNSGKDHVFVLGKISWDFRRTNDSPWGTRLLEFDKMQNPIKLLIERQPWHVNDIGIPHPTYFHPKSDKDIIDWQLRIIRSNRKNLVSFAGAARADADDQIRSILIDQCSSNIDGKCKFLNCSSVKCYEPETIIDLFVESEFCLQPPGDSPTRKSVFDSLISGCIPVIFDPFTAYYQYPWHLPEDYDKYSVFMDKKEVREMNVNVVERLANISLRERENMRRYIVYELLPSVVYGDHNAELEKFQDAFAITMNNLLERVSRFKD 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00225 1483 Pfam Plant phosphoribosyltransferase C-terminal 861 1014 IPR013583 -
Car08g00225 1483 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1014 - -
Car08g00225 1483 CDD C2B_MCTP_PRT_plant 278 402 - -
Car08g00225 1483 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Car08g00225 1483 CDD C2C_MCTP_PRT_plant 442 592 - -
Car08g00225 1483 Pfam C2 domain 5 94 IPR000008 -
Car08g00225 1483 Pfam C2 domain 441 546 IPR000008 -
Car08g00225 1483 Pfam C2 domain 279 372 IPR000008 -
Car08g00225 1483 Pfam C2 domain 603 716 IPR000008 -
Car08g00225 1483 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 441 594 IPR035892 -
Car08g00225 1483 CDD C2D_MCTP_PRT_plant 604 733 - -
Car08g00225 1483 ProSiteProfiles C2 domain profile. 586 714 IPR000008 -
Car08g00225 1483 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 137 IPR035892 -
Car08g00225 1483 Pfam Exostosin family 1096 1427 IPR040911 -
Car08g00225 1483 ProSiteProfiles C2 domain profile. 260 380 IPR000008 -
Car08g00225 1483 SMART C2_3c 5 106 IPR000008 -
Car08g00225 1483 SMART C2_3c 442 540 IPR000008 -
Car08g00225 1483 SMART C2_3c 278 374 IPR000008 -
Car08g00225 1483 SMART C2_3c 604 713 IPR000008 -
Car08g00225 1483 CDD C2A_MCTP_PRT_plant 5 130 - -
Car08g00225 1483 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 277 416 IPR035892 -
Car08g00225 1483 ProSiteProfiles C2 domain profile. 424 545 IPR000008 -
Car08g00225 1483 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 603 738 IPR035892 -
Car08g00225 1483 Gene3D C2 domain 259 400 IPR035892 -
Car08g00225 1483 Gene3D C2 domain 588 738 IPR035892 -
Car08g00225 1483 Gene3D C2 domain 425 572 IPR035892 -
Car08g00225 1483 Gene3D C2 domain 1 130 IPR035892 -
Car08g00225 1483 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00225 Car-Chr8 1780972 1786649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00225 158 1014 Lipid Metabolism Gene Families AT4G11610 75.775 0.0 1384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00225 - - gmx:100777951 1804.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00225 08 1780972 1786649 Car08g00225 08 1780972 1786649 ECH