Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00223 ATGAGGCAGATGAAGCCGTTGCAGTTGTTTCATGATTTGGTGAAGACGACACAGAAAGAACGAGGAAGGTTGATTGGTTTAGATGTTGGCGATAAATATGTTGGCCTTGCGCTTTCTGACTTTGATAACAAAATTGCTTCACCTTTCAGTGTTCTTGTCAGGAAGAAGACAAACATTAATTTAATGGCTGCTGATTTTAAGAGTCTGGTCTCCAAATACTCCTTGAAGGGCTTTGTTATTGGCCTCCCTTTTGACAGACATTTGGTGTCTTCTGATGCTGTGAAAGTGAAGGTCTTCATTGATAACCTCCGTAGAACAAACATGTTCGACGGTCTGAAGTATACATATTGGAATGAGTGCTTCACATCAAAGAATGTAGAAATATTGATAAAGCCTTTGAATTTGAATCATCCAGTTCATTCCAAAACTATGCTAGACAAGTTTGCTGCTGTAGGAATACTTCAGGGGTACCTCGACTACGTTAACAGAAAAGCAAGGCTGATAGCACCAGAGTAA 516 0.3992 MRQMKPLQLFHDLVKTTQKERGRLIGLDVGDKYVGLALSDFDNKIASPFSVLVRKKTNINLMAADFKSLVSKYSLKGFVIGLPFDRHLVSSDAVKVKVFIDNLRRTNMFDGLKYTYWNECFTSKNVEILIKPLNLNHPVHSKTMLDKFAAVGILQGYLDYVNRKARLIAPE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00223 171 SMART rnase_8s 22 126 IPR006641 GO:0006139
Car08g00223 171 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 165 - -
Car08g00223 171 SUPERFAMILY Ribonuclease H-like 22 162 IPR012337 -
Car08g00223 171 Pfam Holliday junction resolvase 23 159 IPR005227 GO:0006364
Car08g00223 171 Gene3D - 22 167 IPR037027 GO:0006139
Car08g00223 171 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 162 IPR005227 GO:0006364
Car08g00223 171 CDD YqgF 24 159 IPR005227 GO:0006364
Car08g00223 171 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 165 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00223 - - gmx:100305864 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00223 08 1766841 1772339 Car08g00223 08 1766841 1772339 ECH