Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00219 ATGGTTAATCGACGCTTCACTCAGGTAGCCACCAGCGACGAGGAAGACGAAACCCCACCTCAACACTCCAAGCTACGGAAACGCAAGAGGATGAAGCTTCTAGACGAGGAAGAAGacaacgacgacgataacaacaacaacaacaacgataatgaaaaggagaaatcggatacgcCTCAGACTCCAGATGATGCAAAGCCAATTGGTGATCCACTTAGGGTTTCGGGTAAAGGAAGAGGAAGGAAGAGACATTACGAATCCTTCGAATTCGATGGAAACCAATACACTCTCGAGGATCCTGTTCTTCTTGTGCCTGAGGATAAAGAACAAAAGCCATATGTCGCTATAATTAAGGACATTATACTTAACTATAGTGGCAGCATAATGGTGCTTGGGCAGTGGTTTTATCGTCCGGAAGAAGCTGAAAAAAAAGGCGGTGGAAGTTGGCAATCACGTGATACAAGGGAGCTTTTTTATAGTTTCCACCGTGATGAGGTTCCTGCAGAGTCTGTTATGCATAAGTGTGTGGTGCATTTTGTTCCTTTGAACAAACAGTTTCCGAAACGTAAGCAACATCCTGGCTTTATTGTACAAAAGGTGTACGACACTGTGGAAAAGAAACTTTGGAAGCTGACTGATAAGGACTATGAGGATGTAAAACAGCAAGAAATTGATGAGCTTGTTCAAAAAACTTGTAAACGGATTGGGGAGCTACTAGACGTTGAGCCTGAAGATGCCCCTCCTGCTGACCAGGAGGACGTGATGAAAAATAAAAGAAACTTAAGGAGAAAGAGCATTTCGCCCATTGATGTTTCAAGGGAGGAGGAAGGAGTTGCTAAGAGTGACCAAAATTCAAAGCCTGAAACACCCGGGAGTTGTGTTAATAATGACTCAGAGCATCATCGCATATTAGTGAATTTTAATGTATTAACCGGAAACATTCACCGCGACAAATGGTTGGAGAGGTTGCTTCAACACGTTCAGTACATGTGTAATTACGATGATAGTATCGAAAGGGAAAAGGGATCAGGAAATGCCGATTCTGATGAAAACAAGAATAAAAGCAATGATAAAACTTCAGAAATAGCAAATGACTCTCAGGACAAGGGTCAGAAGAGTTCCGAGTCTTTTGTGTGGCCAGATGCTGCTGTTCCAGCTATAGTTGCTCTTGAAAAAGCTTCACATGAAGCTCTTTCGACAGATTTTCAGAAGTATAACCAAAAGTTGCGGCAATTAAATTTTAATCTCAAGAACAATGCATTGTTAGCACGCCGTCTGTTAAATGGAGAGTTGAAACCTTCAAAAATTTTGAATATGACACCCACTGAATTAAAGGTACAATATCTGTCTAGCTTTATTTCCTTAATTCCATGA 1374 0.3974 MVNRRFTQVATSDEEDETPPQHSKLRKRKRMKLLDEEEDNDDDNNNNNNDNEKEKSDTPQTPDDAKPIGDPLRVSGKGRGRKRHYESFEFDGNQYTLEDPVLLVPEDKEQKPYVAIIKDIILNYSGSIMVLGQWFYRPEEAEKKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFVPLNKQFPKRKQHPGFIVQKVYDTVEKKLWKLTDKDYEDVKQQEIDELVQKTCKRIGELLDVEPEDAPPADQEDVMKNKRNLRRKSISPIDVSREEEGVAKSDQNSKPETPGSCVNNDSEHHRILVNFNVLTGNIHRDKWLERLLQHVQYMCNYDDSIEREKGSGNADSDENKNKSNDKTSEIANDSQDKGQKSSESFVWPDAAVPAIVALEKASHEALSTDFQKYNQKLRQLNFNLKNNALLARRLLNGELKPSKILNMTPTELKVQYLSSFISLIP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00219 457 MobiDBLite consensus disorder prediction 340 365 - -
Car08g00219 457 MobiDBLite consensus disorder prediction 46 61 - -
Car08g00219 457 MobiDBLite consensus disorder prediction 340 375 - -
Car08g00219 457 SUPERFAMILY Elongation factor TFIIS domain 2 311 444 IPR036575 GO:0006351
Car08g00219 457 MobiDBLite consensus disorder prediction 249 282 - -
Car08g00219 457 MobiDBLite consensus disorder prediction 9 23 - -
Car08g00219 457 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 449 - -
Car08g00219 457 MobiDBLite consensus disorder prediction 243 297 - -
Car08g00219 457 CDD BAH_plant_3 75 221 - -
Car08g00219 457 Pfam Transcription factor S-II (TFIIS), central domain 311 446 IPR003618 GO:0006351
Car08g00219 457 MobiDBLite consensus disorder prediction 283 297 - -
Car08g00219 457 ProSiteProfiles TFIIS central domain profile. 315 457 IPR003618 GO:0006351
Car08g00219 457 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 449 - -
Car08g00219 457 SMART BAH_4 93 212 IPR001025 GO:0003682
Car08g00219 457 SMART mid_6 349 448 IPR003618 GO:0006351
Car08g00219 457 ProSiteProfiles BAH domain profile. 93 212 IPR001025 GO:0003682
Car08g00219 457 Pfam BAH domain 94 210 IPR001025 GO:0003682
Car08g00219 457 MobiDBLite consensus disorder prediction 1 81 - -
Car08g00219 457 Gene3D - 334 446 IPR036575 GO:0006351
Car08g00219 457 Gene3D - 59 237 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00219 Car-Chr8 1725107 1729393 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00219 - - cam:101495294 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00219 08 1725107 1729393 Car08g00219 08 1725107 1729393 ECH