Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00213 ATGAAGCATACAGAAAAGAAAAATGCATTTCATGCTCCAAGAGTCCATGAGTCCATACATTCACTAACAAACAATGGACATGCCAGGTTCCCAGAGAAAAATCCTCTTATAAACCCTTTAGCCTCCACAATTGGCATAGTACCTCCAAGGCCTAGAAGGATAATCCTTGTTAGACATGGAGAGAGTGAAGGAAACGTGGATGAGAGTGTTTACACAAGGGTACCTGATCCTAAAATAGGTCTTACAAATAGAGCTCGTCCCTTTGATCGCTCAAGAATTGCGGGATTCAGAGAAGAACCCCGCATTCGAGAACAAGATTTTGGGAATTTTCAAAATAGAGAGAAGATGCAAGTTGAAAAAGCACAACGCAATCTTTATGGTCGTTTCTTTTATCGATTTCCCGATGGAGAATCTGCCGCCGATGTATACGATAGAATCACAGGATTTAGAGAAACACTTAGAGCAGATATTAACATTGGACGGTATCAGCCACCTGGGGAGCAAAAAACGGACGTAAATTTGGTTATTGTATCGCACGGTTTAACACTTAGAGTTTTCCTCATGAGGTGGTATAAGTGGACGGTTGAACAGTTTGAGGGTCTCAATAACTTTTGCAATGGAGGCATGCTCGTCATGGGAAAGGGTTATGGTGGAAGGTATAGCTTATTGATGCATCATGGTGAACAAGAGTTAAGACAGTTTGGATTGACTGAAGAAATGTTGATTGATCAAGAATGGCATAAAATTGCAAAGCCTGCTGATCTCAATTATGATTGTCCAATGGTGAATTCCTTCTTTCCACATCTTCAAGAAGAAACAAGCAGAGTTCAAAATATGTAG 840 0.4048 MKHTEKKNAFHAPRVHESIHSLTNNGHARFPEKNPLINPLASTIGIVPPRPRRIILVRHGESEGNVDESVYTRVPDPKIGLTNRARPFDRSRIAGFREEPRIREQDFGNFQNREKMQVEKAQRNLYGRFFYRFPDGESAADVYDRITGFRETLRADINIGRYQPPGEQKTDVNLVIVSHGLTLRVFLMRWYKWTVEQFEGLNNFCNGGMLVMGKGYGGRYSLLMHHGEQELRQFGLTEEMLIDQEWHKIAKPADLNYDCPMVNSFFPHLQEETSRVQNM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00213 279 PANTHER OS06G0109000 PROTEIN 85 270 - -
Car08g00213 279 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 85 270 - -
Car08g00213 279 PANTHER OS06G0109000 PROTEIN 20 85 - -
Car08g00213 279 SMART PGAM_5 53 186 IPR013078 -
Car08g00213 279 Gene3D - 84 240 IPR029033 -
Car08g00213 279 SUPERFAMILY Phosphoglycerate mutase-like 51 222 IPR029033 -
Car08g00213 279 Pfam Histidine phosphatase superfamily (branch 1) 96 203 IPR013078 -
Car08g00213 279 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 56 65 IPR001345 GO:0003824
Car08g00213 279 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 20 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00213 Car-Chr8 1678049 1680068 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00213 - - mtr:MTR_5g010090 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00213 08 1678049 1680068 Car08g00213 08 1678049 1680068 ECH