Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00206 ATGTCGACATCTTTTTTAACCCCGTCTTCCTTCTCCTTGCAATTCGCAACATCCATCAAATCTTCTCATCCAATTCCATTCTCTTGTTCTTTTCCTCTCAAACGCCATACCCTCATTCTCAAACCAGTCTCAGCTTCAGGGGCTGTTACTCCAACCACCTCCATTGAAATCGAAAAATCCCCAATCTCCGCCACTCCCTCCAAGGTTCTTCCTTTTCGGGTTGGCCATGGTTTTGACCTTCACCGATTGGAACCCAATTACCCCTTAATAATTGGTGGAATTAACATACCCCATGATAGAGGTTGCGAAGCTCATTCCGATGGGGATGTTTTGCTTCACTGCGTGGTGGATGCAATTTTAGGGGCTTTAGGTCTTCCTGATATAGGACAGATTTTTCCGGATTCTGATCCTAAGTGGAAGGGATGTGACTCTTCGGTGTTTGTCCATGAATCTGTCAGTGATATTCTACATACTAACATTACTTTCTGCTTTATTTTCTCCATTGAAATGTGA 513 0.4347 MSTSFLTPSSFSLQFATSIKSSHPIPFSCSFPLKRHTLILKPVSASGAVTPTTSIEIEKSPISATPSKVLPFRVGHGFDLHRLEPNYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGCDSSVFVHESVSDILHTNITFCFIFSIEM 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00206 170 ProSitePatterns 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 106 121 IPR020555 GO:0008685
Car08g00206 170 SUPERFAMILY IpsF-like 71 159 IPR036571 GO:0008685|GO:0016114
Car08g00206 170 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC 7 153 IPR003526 GO:0008685|GO:0016114
Car08g00206 170 PANTHER 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE 7 153 - -
Car08g00206 170 CDD MECDP_synthase 73 150 IPR003526 GO:0008685|GO:0016114
Car08g00206 170 Pfam YgbB family 72 161 IPR003526 GO:0008685|GO:0016114
Car08g00206 170 Gene3D - 71 165 IPR036571 GO:0008685|GO:0016114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00206 K01770 - gmx:100306378 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00206 08 1640662 1643122 Car08g00206 08 1640662 1643122 ECH