Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00204 ATGGAAGAAGATCTCCGAAATTCGGCGCTAAAGTTTTTCACTGATCAAGAGCTTTGTTATGCTGATATCATCCCTCCTGCTCAGGTCCGAGCTAGAATTGAAGTGTCAGTGCTCAGTTTCCTCAAAATTTTGAATGCATCCAACCCTGCCATCTCAGATTTGCCTCTGATTCAAAGAAAATTGAGCAACAGTCGAGTGAATCATGGCATGTTGACTGAATTGTCATATGTTTTTCTCTCTAATTCTGTATCTACAAGGTCTCTAATGAGACCTAATGCAGCAAAGGCCTTTGTTAGGGTGTGGAAGGTGATGGAAATGTGCTATCAGATATTGCTTCAGGAAAAACGTGTCACACAGAGGGAACTCTTCTACAAGCTTCTGTGTGATTCGCCACATCTATTTCCTTCTCAAAAAGATGTCAATAGGACTATTCAAGATCTTGTAGCGTTGCTTCGGTGCAGCAGATACAGTCTTGGAATCATGGCATCTAGTCGAGGACTCATTGCTGGTCGTCTGATTTTGCAGGAACCGGGCAAAGAGGTTGTTGATTGCTCTGTGTGTGGATCTTCTGGACATACAATTTCTGGTGACTTTAATTTGTTAGAGAAATTGATTCTAAATTCAGATGCACGTTACATCATAATTGTGGAAAAGCATGCAATATTTCAACGGCTGGCTGAAGATAGGTTTTTTCATCAAATTCCTAGCATTCTTATCACAGCTAAAGGTTACCCAGATATGGCCACAAGATTTCTTCTTCATCGAATCAGTCGAGCATTTCCGGAATTGCCAATTTTAGCTTTGGTGGATTGGAATCCTGCTGGATTAGCTATACTATGCACCTTCAAATTTGGAAGTGTAGGAATGGGCCTAGAGTCCTATAGATACGCTTGCAATGTCAAGTGGTTAGGACTGCGGGGGCATGATCTACCCATGCTGCCTGATCAATCTCTTGTTCCATTGAAGACAAAGGACCTACAAATTGCTCAAAGCTTGATGTCCTCAAAAATCTTACAGGTAAATCATTCGGAACCTCTGAATACATCCCTAACTATCCTCGTCCTGCAGGCCTGA 1074 0.419 MEEDLRNSALKFFTDQELCYADIIPPAQVRARIEVSVLSFLKILNASNPAISDLPLIQRKLSNSRVNHGMLTELSYVFLSNSVSTRSLMRPNAAKAFVRVWKVMEMCYQILLQEKRVTQRELFYKLLCDSPHLFPSQKDVNRTIQDLVALLRCSRYSLGIMASSRGLIAGRLILQEPGKEVVDCSVCGSSGHTISGDFNLLEKLILNSDARYIIIVEKHAIFQRLAEDRFFHQIPSILITAKGYPDMATRFLLHRISRAFPELPILALVDWNPAGLAILCTFKFGSVGMGLESYRYACNVKWLGLRGHDLPMLPDQSLVPLKTKDLQIAQSLMSSKILQVNHSEPLNTSLTILVLQA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00204 357 Pfam Type IIB DNA topoisomerase 95 160 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Car08g00204 357 Coils Coil 355 357 - -
Car08g00204 357 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 16 340 IPR002815 GO:0003677|GO:0003918|GO:0005694
Car08g00204 357 Gene3D - 25 163 IPR036388 -
Car08g00204 357 CDD TOPRIM_TopoIIB_SPO 211 335 IPR034136 -
Car08g00204 357 Gene3D - 164 354 - -
Car08g00204 357 SUPERFAMILY DNA topoisomerase IV, alpha subunit 94 344 IPR036078 GO:0003677|GO:0005694
Car08g00204 357 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 16 340 - -
Car08g00204 357 PRINTS DNA topoisomerase VI subunit A family signature 155 170 IPR002815 GO:0003677|GO:0003918|GO:0005694
Car08g00204 357 PRINTS DNA topoisomerase VI subunit A family signature 237 258 IPR002815 GO:0003677|GO:0003918|GO:0005694
Car08g00204 357 PRINTS DNA topoisomerase VI subunit A family signature 270 286 IPR002815 GO:0003677|GO:0003918|GO:0005694
Car08g00204 357 PRINTS DNA topoisomerase VI subunit A family signature 137 154 IPR002815 GO:0003677|GO:0003918|GO:0005694
Car08g00204 357 PRINTS DNA topoisomerase VI subunit A family signature 213 230 IPR002815 GO:0003677|GO:0003918|GO:0005694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00204 K10878 - gmx:100784732 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00204 08 1628938 1631417 Car08g00204 08 1628938 1631417 ECH