Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00198 ATGCAATCACATTCACTCCCTTCGTTTCCAAAACCATTCGCATCATCCTCTTCTTTTACTtctcgctctaacactcacttcactctccaatcttcatctttcgccacctcactTATCTCCTCTTCCATTTTTCCTCCTCCTCGCTGCAACCGTATTCAAATTGGTGGTAATATTTTTCGGGGTACATCGGGATTCGCACGTGCTTACCGCGCTGCATTATCTAAACTTCACAATTCCGATTACTCTGTTGCCGAAAACTCCGATTGTGAATGTCACTTGGCAACGCCGATTGTTTCTTCTGATGCTGATAATAATCGATCGATAGAACTTGTGAAGTTTATGCTGTTCTTTGCGTTCCTTACACTCCAAGACTCTTATCCAGCAGCTGCCGCTTCTGATTTTGCTTCTGGTTTGAATTCAATTCCCATATTTGGAGATGTCGGTGACTTAAGCACAGGTTTTGCTTCAGCTTTTCTGCTGATATTTTTCTCTGAACTGGGAGACAAGACTTTTTTCATTGCAGCACTGTTAGCAGCTAGGAATTCAGCTGGTGTCGTTTTCCTTGGAACATTTGGCGCACTTGCGGCAATGACTGTCATTTCTGTCGGTCTTGGACGGACTTTTCATTATGTTGACGAACTCTTGCCATTCAGGTTTGGAGAAACTGATTTACCTATTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCCTGCTGGATGCCTCATCTAGTGATAGCCAAAAATCAGATGATGAACAGAAGGAGCCCTTGCAGCAGCTTCTTCGCCCCTGGGAGTCATAG 816 0.4105 MQSHSLPSFPKPFASSSSFTSRSNTHFTLQSSSFATSLISSSIFPPPRCNRIQIGGNIFRGTSGFARAYRAALSKLHNSDYSVAENSDCECHLATPIVSSDADNNRSIELVKFMLFFAFLTLQDSYPAAAASDFASGLNSIPIFGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFLGTFGALAAMTVISVGLGRTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEPLQQLLRPWES 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00198 271 ProSitePatterns Uncharacterized protein family UPF0016 signature. 165 174 IPR001727 -
Car08g00198 271 PANTHER PROTEIN PAM71, CHLOROPLASTIC 84 260 - -
Car08g00198 271 MobiDBLite consensus disorder prediction 247 271 - -
Car08g00198 271 Pfam Uncharacterized protein family UPF0016 156 239 IPR001727 -
Car08g00198 271 MobiDBLite consensus disorder prediction 1 20 - -
Car08g00198 271 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 84 260 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00198 Car-Chr8 1551163 1556204 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00198 - - lang:109331470 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00198 08 1551163 1556204 Car08g00198 08 1551163 1556204 ECH