Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00193 ATGCGTAGCCGGGGATCGCAAAACCGGCTATCTGGTAACTCTTTTGGATCTCGAGTTTCTGCTCTCATCTTTACCATGATTGCTACCATGGCCACTATCTATGTTGCCGGCCGGCTATGGCAGGATGCGGAGAATAGGGTGTATTTAATCGAACAGCTTGAAAAAAGAACCAGTCAGGGTCATTCTGCTGTATCTGTTGATGATACACTCAAAATCTTAGCCTGCAGGGAACAAAAAAAGAAGTTGTTTGACCTAGAGACGGAGTTATCTGCAGCTAGAAAGGAAGGTTTTGTTTCAAAGCAATTGTCAGCAAACGATGGGAAGTATCCTACAAAAAAGACACTTTCAGTTATTGGAGTAATGACAACCTTTGGCCGAAAGAAGAACAGAGATGCAGTTCGTAAGGCGTGGATGCCGTCAGGTGCATCCTTGAAAAACCTCGCAGATGAGAAAGGCATAATTGTGAGATTTGTAATAGGAAGAAGTGCAAATCGCGGAGACAGTTTGGACAAAGAGATTGAAAAAGAAAACAGTCAGACCAATGATTTCATCATTCTTGACAACCAAGTGGAGGCAGTTGAAGAGAGTGCAAAAAAGACAAAGTCGTTCTTCATTTATGCTGTGGACAACTGGGATGCTGAATTTTATGCCAAGGTCAATGATGATGTCTATGTTAATCTTGATTCCCTTGGAGTAGTGCTAACTTCTCATTTGGACAAGCCCCGTGCATATATTGGTTGTATGAAATCGGGAGAAGTTTTCTCTGAACCGACACATCAATGGCATGAGCCAGACTGGTGGAAATTCGGCGATGGAAAATCGTACTTTCGACATGCTTCAGGCGAGGTTTATGCCATTTCAAAAGCATTGGCCCAGTTTATTTCAATAAACAGATCTATTCTCCGTACATATGCACATGATGATATAAGTACCGGATCATGGTTTATTGGGCTGGATGTTATCCACGTTGATGAAAATAAGTTTTGTTGTTCATCGTGGTCCACAGGTGCAATTTGTGCAGCAGTATGA 1029 0.4227 MRSRGSQNRLSGNSFGSRVSALIFTMIATMATIYVAGRLWQDAENRVYLIEQLEKRTSQGHSAVSVDDTLKILACREQKKKLFDLETELSAARKEGFVSKQLSANDGKYPTKKTLSVIGVMTTFGRKKNRDAVRKAWMPSGASLKNLADEKGIIVRFVIGRSANRGDSLDKEIEKENSQTNDFIILDNQVEAVEESAKKTKSFFIYAVDNWDAEFYAKVNDDVYVNLDSLGVVLTSHLDKPRAYIGCMKSGEVFSEPTHQWHEPDWWKFGDGKSYFRHASGEVYAISKALAQFISINRSILRTYAHDDISTGSWFIGLDVIHVDENKFCCSSWSTGAICAAV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00193 342 Coils Coil 75 95 - -
Car08g00193 342 Gene3D - 106 332 - -
Car08g00193 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car08g00193 342 Pfam Domain of unknown function (DUF4094) 17 94 IPR025298 -
Car08g00193 342 PANTHER HEXOSYLTRANSFERASE 1 338 - -
Car08g00193 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 338 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00193 Car-Chr8 1509578 1516132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00193 22 342 Glycosyltransferase AT5G53340 67.290 2.17e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00193 K20854 - gmx:100802753 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00193 08 1509578 1516132 Car08g00193 08 1509578 1516132 ECH