Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00188 ATGGATGAAGAATTGGTTCATGCGGCAACTCCATTAGAGACTGTTGAGGATTCACAGCGCCAGAACAAAGAGGATGATCAATATTCATCGAAAATCGAAAGCCGAAGAATCCTTAAGTCTCAACAAGTCTTTATACCTGTTAATCAGGACTACTCCCAAACACAACCAAGGGAATATGATGATATTATACATGGTAAAAGTGTAGTTGAGGCTTTAAGCGAGGCAGCTACATCACAACCTCCTTATGCAATGGTTGAAGAACTAACAGTAAAAAGTTACAATGGTTCGACCTTCGATATCGGTACATCAAACAACCAAGTGCAAATGTATAATCAACAGAAACATTGGCAGAATCTTTATCAGCTTGCTAATAATAATTCAGGAAATGGAAATTCGGTAAGCGATATTGGGCTGGTAAATAGTGGCCAGGGTACATCTAGTGCTCGGGAGGATATTGGATCTGCAGGCTTTCCCGAGCTGTTAGCTAGAAAATCACACAGTGATGGTCAGAGCAACGTCGTTGAACACTTGCCCGCTGCTGAAAGTAAAGAGGGTACAGGTGATTTTCATCGAGGAATGCGGACAAAAATGATATCCAAATCGGGATTTGCTGAGTATTTTATTAAAAATACATTGAAGAATAAGGGTGTTGTACATAAAGGTCCATCTTCTGATGGCTTCTATGTTCAGTCTAGACAGCAAAATCAGACAAAGGCTGGCAGTGATGCTGAGCGGAATCAGATTAAAACTGGCATTGGCGCAGATCAGAATCAGATGAAGACCAGCATTGGGACAGACCAGAAACATACGAAGACTGGTATCGGTGCTCAGTCAAACTCCAATATATCAGTTAACTACGGTTCCAAAACTGCAACGTTTCCCTTTCATAGTGATGCTGCTGTTCCTAGATCTAATATGACTGAATGTAACGGTGTAACATTGAGAGAATGGTTAAAATCTGGGCAGCGCAGAGCAGGCAAAGTGGAAAGTTTAAATATATTTAGGAAGATTGTGGATTTGGTGGACGACTCTCACTCTCGGGGAATTGCATTGCATAACCTGTGTCCATCTTACTTTAAACTGTTACTATCAAATCAGGTCATGTATATTGGGTTACCAACTCAAAAACAGATGGCAGGCAGTGTTGTGAATCCTGAAGTTCTTCATTTGGATAATTCATTTATTAGAAAAAGGATGTCTGAGGAAGTTACATCATCTTCTATTGATATGGGGTCCAAGAAACAGAAATTTAATGAGAATGTGAGGGTTACTGGGAGTGACTTGTGTCTTGAGACTGCTAATCATCATGGAGTTCAAATTCCTACAATTGGTTCCCTAGATTATCAAAATGAATATGAGGAAGATATCCAATTTTCTGAGTATGATATTGGGAGAATGTCTGGCATCCCTAGTGTATCTAATACAGGTCAATTGCCATCGACTTCTTTATGTGAAAGATTGGAAAATAAGTGGTATGCAAGTCCTGAGGGAGGTTGCACAACATCATCAAATATCTACTGCCTTGGTGTCCTCCTTTTTGAGTTACTAGGCCATTTTGACTCTGAAAGAGGGCATATTGCAGCAATGTCTGATCTTCATCATAGGATTCTTCCTCCAGTTTTCCTATCAGAAAATCCTAAGGAAGCTGGCTTTTGTCTTTGGCTGCTGCATCCTGAACCATCATCACGTCCAACAACAAGGGAAATGCTACAATCTGAAGTAATTAATGGATTACAAGAGTTGTGTAGTGAGGAATTGTCGTCATGTATAGATCAAGAAGATGCAGAATCGGAATTGTTATTGCATTTCCTCGTCTCGTTAGAAGACCAGAAGCAGGGCGATGCCTCCAAATTGGCTGAACAGGTAGAGTGCTTGGAAGCAGATATAGAAGAGGCCAAAAGGCGGCATGGCTTAAGAAAATCTTTGGTTACCTCTGGCTTGCAGAACGAGATTATGCCTCTTAAAAAGGAACTTTTGAGTGTAGGAATGCTGCCCACATTATCCCCAATCTCTAATACAAATGAACTAAGATTGATGAGAAATATAGGCCATCTTGAAAGTGCTTACTTTTCCATGAGATCCAAAGTTCAGCTTTCTGAAATTGATGCCACAGATCACCCTGACAAAGATATACTAAGAACTCGTGAGAACTGGAATGTGACCCAAAAAGGCGAGGAACAACATAAAAGTAAAGATGCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTATAGCAGGCTTGAAGTGCGGGGTATACTAAGAAATGCAGATTTTAACAATCCTGCAAATGTGATATGCTCTCTGAGCTTTGATCGGGATGAAGATTACTTTGCTTCTGCTGGGATATCTAAGAAAATAAAAATATTTGAGTTTAGTTCACTTTGCAATGACTCTGTTGATATCCATTATCCTGTTGTTGAGATGTCAAACAGATCAAAGCTCAGTTGTGTTTGCTGGAATAACTATATTAAGAATTATCTTGCCTCTACAGACTACGATGGTGTAGTGAAGGTATGCTTTGCAGACACCACTTGA 2544 0.4002 MDEELVHAATPLETVEDSQRQNKEDDQYSSKIESRRILKSQQVFIPVNQDYSQTQPREYDDIIHGKSVVEALSEAATSQPPYAMVEELTVKSYNGSTFDIGTSNNQVQMYNQQKHWQNLYQLANNNSGNGNSVSDIGLVNSGQGTSSAREDIGSAGFPELLARKSHSDGQSNVVEHLPAAESKEGTGDFHRGMRTKMISKSGFAEYFIKNTLKNKGVVHKGPSSDGFYVQSRQQNQTKAGSDAERNQIKTGIGADQNQMKTSIGTDQKHTKTGIGAQSNSNISVNYGSKTATFPFHSDAAVPRSNMTECNGVTLREWLKSGQRRAGKVESLNIFRKIVDLVDDSHSRGIALHNLCPSYFKLLLSNQVMYIGLPTQKQMAGSVVNPEVLHLDNSFIRKRMSEEVTSSSIDMGSKKQKFNENVRVTGSDLCLETANHHGVQIPTIGSLDYQNEYEEDIQFSEYDIGRMSGIPSVSNTGQLPSTSLCERLENKWYASPEGGCTTSSNIYCLGVLLFELLGHFDSERGHIAAMSDLHHRILPPVFLSENPKEAGFCLWLLHPEPSSRPTTREMLQSEVINGLQELCSEELSSCIDQEDAESELLLHFLVSLEDQKQGDASKLAEQVECLEADIEEAKRRHGLRKSLVTSGLQNEIMPLKKELLSVGMLPTLSPISNTNELRLMRNIGHLESAYFSMRSKVQLSEIDATDHPDKDILRTRENWNVTQKGEEQHKSKDALGTFFDGLCKYARYSRLEVRGILRNADFNNPANVICSLSFDRDEDYFASAGISKKIKIFEFSSLCNDSVDIHYPVVEMSNRSKLSCVCWNNYIKNYLASTDYDGVVKVCFADTT 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00188 847 MobiDBLite consensus disorder prediction 226 244 - -
Car08g00188 847 Gene3D Transferase(Phosphotransferase) domain 1 309 584 - -
Car08g00188 847 SUPERFAMILY WD40 repeat-like 764 841 IPR036322 GO:0005515
Car08g00188 847 MobiDBLite consensus disorder prediction 223 244 - -
Car08g00188 847 Gene3D - 737 847 IPR015943 GO:0005515
Car08g00188 847 SUPERFAMILY Protein kinase-like (PK-like) 307 582 IPR011009 -
Car08g00188 847 Coils Coil 615 635 - -
Car08g00188 847 MobiDBLite consensus disorder prediction 1 32 - -
Car08g00188 847 MobiDBLite consensus disorder prediction 17 32 - -
Car08g00188 847 SMART WD40_4 754 793 IPR001680 GO:0005515
Car08g00188 847 SMART WD40_4 804 843 IPR001680 GO:0005515
Car08g00188 847 PANTHER PROTEIN SPA1-RELATED 2 1 841 - -
Car08g00188 847 PANTHER PROTEIN SPA1-RELATED 2 1 841 IPR044630 GO:0009640
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00188 Car-Chr8 1471412 1476005 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00188 K16240 - gmx:100778303 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00188 08 1471412 1476005 Car08g00188 08 1471412 1476005 ECH