Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00185 ATGTTTAAAGGAAATGGAACCAATTGCGCACGTATTATCCCTAATTCAGCAGTGAAGTTTTTTAGCTATGAGCAAGCATCTAAGGGTATTTTAAATCTCTACCGGTTGCAAACTGGAAATGAAGAAGCTCAACTCTCTCCACTTCTGCGTCTTGGAGCTGGGGCATGTGCAGGAATCATTGCAATGTCTGCAACTTACCCTATGGACCTGGTGCGAGGACGCCTAACTGTACAGACAGAAGCATCTCCTCGTCAATACAGAGGAATTTTTAATGCTCTTTCAACAGTCTTCCGGGAAGAAGGCGCTAGAGCATTGTATAAAGGATGGTTACCTTCAGTCATAGGAGTTATACCGTACGTGGGTCTAAATTTTTCTGTATATGAATCTCTAAAAGACTGGTTGATTAAAACAAAACCACTTGGAATAGCTAAAGACTCAGAGCTAAGCGTGACGACAAGGCTTGCATGTGGGGCTGCTGCTGGAACTATTGGCCAGACAGTGGCATACCCTCTTGATGTCATTCGCAGAAGAATGCAGATGGTGGGATGGAAAGGTGCTGCTTCGGTTGTTGCTGGTGATGGGAAGGGAAATGCTGAGTATACTGGCATGGTTGATGCATTCAGGAAAACAGTAAAGTATGAAGGATTTGGAGCTTTATACAAGGGCTTAGTCCCCAATTCTGTGAAGGTTGTCCCTTCCATAGCCATTGCCTTCGTGACATACGAGATGGTAAAGGATGTTCTTGGAGTTGAAATAAGAATATCTGACTGA 771 0.4384 MFKGNGTNCARIIPNSAVKFFSYEQASKGILNLYRLQTGNEEAQLSPLLRLGAGACAGIIAMSATYPMDLVRGRLTVQTEASPRQYRGIFNALSTVFREEGARALYKGWLPSVIGVIPYVGLNFSVYESLKDWLIKTKPLGIAKDSELSVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMVGWKGAASVVAGDGKGNAEYTGMVDAFRKTVKYEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEIRISD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00185 256 Gene3D Mitochondrial carrier domain 1 250 IPR023395 -
Car08g00185 256 Pfam Mitochondrial carrier protein 147 248 IPR018108 -
Car08g00185 256 Pfam Mitochondrial carrier protein 45 136 IPR018108 -
Car08g00185 256 ProSiteProfiles Solute carrier (Solcar) repeat profile. 45 133 IPR018108 -
Car08g00185 256 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 247 IPR018108 -
Car08g00185 256 PANTHER SOLUTE CARRIER FAMILY 25 1 251 - -
Car08g00185 256 PRINTS Mitochondrial carrier protein signature 106 124 IPR002067 GO:0055085
Car08g00185 256 PRINTS Mitochondrial carrier protein signature 4 24 IPR002067 GO:0055085
Car08g00185 256 PRINTS Mitochondrial carrier protein signature 157 179 IPR002067 GO:0055085
Car08g00185 256 PRINTS Mitochondrial carrier protein signature 60 78 IPR002067 GO:0055085
Car08g00185 256 SUPERFAMILY Mitochondrial carrier 1 243 IPR023395 -
Car08g00185 256 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00185 Car-Chr8 1449801 1462855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00185 1 251 EF-hand Containing Proteins AT5G51050 36.653 5.57e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00185 K14684 - gmx:100784834 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00185 08 1449801 1462855 Car08g00185 08 1449801 1462855 ECH