Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00173 ATGGCTTCTGAGAGTAGCAATTTTGACATCTCTGGACCCTTACATCTAACTCATGTCAATTGGGATAACCCATATAATCGAAAGTCAGTAGCTGCTAGTTTGGTCCAAGGTGCTTACATTCTAGAAGAGGATCGACAAAAACAAAGGGAAGGTTCTAATGCTCTAGCACCTCGTTGGTGGACATTCTTCCACTTTCAACTCCTTCATACACTAGTTGATGATGTTGGTAACTCCATATTTGGTGCAATTTATGAGTTCAAGCCTCCATCATCAATGTACAACAACACCTTACATAGAGGTCCTCGTTATGTAATCGCGTTTCGAGGGACTATGATCAAAGTAAGCTCATTTATGCGTGATATTAGATTGGATCTCAAACTTCTCAAAAATGGACTTCATCGAACTTCACGTTCAAAAATTGCTATCGAAGCCGTCAAAAACACAGTGGTTAGTGTTGGCAGTTCCAATTTATGGTTGGCCGGGCACTCTCTAGGATCAGGCATGGCATTGCTTGCTGGAAAAACAATGGCTAAAAATGGTGTATTCATTGAGACTTTTCTTTTCAACCCTCCATATGCATATGCTCCAGTCGCGAGAATCAGAAACAGGAAATGGAAACGTCGGATTAAATTCGCTGGCAGTATGCTAACGGCCGGATTCGCAATTGCCATGAAGGATAAGAAAAATTCTACCTTTGATTCATTTGTTGCTCTGCCTAACTGGATTCCATGCTTATTTGTGAATCCACATGACTATATATGTTCAGGGTATGTCGAATACTTTGAACAGAGAAGAAAAATGGAGGAGATTGGTGCTGGAAGCATTGAGAAGATAGCAACACAAAACTCAGTTGTTTCTCTTATGATGAGTGCATTGTTTGATAAGGATTCTGAACCTATGCATGTCATTCCTTCAGCTAATGTGACTGAGAACTTAACTCCACAACAGAACTTCATAGAAGCTCATAGACTTAACCAGTGGTGGAAACCAGACTTACACTTGGAATCCAAGCTCTACAAATACCAGTAG 1029 0.4052 MASESSNFDISGPLHLTHVNWDNPYNRKSVAASLVQGAYILEEDRQKQREGSNALAPRWWTFFHFQLLHTLVDDVGNSIFGAIYEFKPPSSMYNNTLHRGPRYVIAFRGTMIKVSSFMRDIRLDLKLLKNGLHRTSRSKIAIEAVKNTVVSVGSSNLWLAGHSLGSGMALLAGKTMAKNGVFIETFLFNPPYAYAPVARIRNRKWKRRIKFAGSMLTAGFAIAMKDKKNSTFDSFVALPNWIPCLFVNPHDYICSGYVEYFEQRRKMEEIGAGSIEKIATQNSVVSLMMSALFDKDSEPMHVIPSANVTENLTPQQNFIEAHRLNQWWKPDLHLESKLYKYQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00173 342 Pfam Lipase (class 3) 143 181 IPR002921 GO:0006629
Car08g00173 342 SUPERFAMILY alpha/beta-Hydrolases 44 258 IPR029058 -
Car08g00173 342 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 342 - -
Car08g00173 342 PANTHER SUPERFAMILY PROTEIN, PUTATIVE-RELATED 3 342 - -
Car08g00173 342 Gene3D alpha/beta hydrolase 31 270 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00173 Car-Chr8 1341834 1344311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00173 1 274 Acyl Lipid Metabolism Gene Families AT2G05260 49.477 8.57e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00173 - - gmx:100786952 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00173 08 1341834 1344311 Car08g00173 08 1341834 1344311 ECH