Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00172 ATGCATCCCAAAATCTCCGTCACCGCCGTCCAATTCCCCTCCTTTTCCGTCACCAACAACGGCACCACCGTCAATTTCACTTTCTCACAGTACGCTTCAGTTAAAAACCCTAACAAAGGCACTTTCTCACACTACGATAGCTCATTTCAGCTTCTCTACAATGGAAAACCAATCGGATTCATGTTCGTCCCCGCCGGCAAGATTAATGCCCATAGAACGGAGTACATAGCGGCCACATTTACCGTTCAGTCTCTTCCATTGGGCCTTGGGCCCAATAATCGGGATGGGCTTGATAAAATGAGGCCCACTATGGAAATTGAATTCAGAATAGAGATGAGTGGGAGAGTGAGGGTGTTGCATCTGTTCACTCATCATGTTGAAGCCATAGCTGATTGCAGGGTCGCCATCACTATCTCCGATGGATCCGTTTTAGGTTTTCACTGCTAA 447 0.472 MHPKISVTAVQFPSFSVTNNGTTVNFTFSQYASVKNPNKGTFSHYDSSFQLLYNGKPIGFMFVPAGKINAHRTEYIAATFTVQSLPLGLGPNNRDGLDKMRPTMEIEFRIEMSGRVRVLHLFTHHVEAIADCRVAITISDGSVLGFHC 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00172 148 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 2 148 - -
Car08g00172 148 Gene3D - 1 131 - -
Car08g00172 148 Pfam Late embryogenesis abundant protein 33 127 IPR004864 -
Car08g00172 148 SUPERFAMILY LEA14-like 3 84 - -
Car08g00172 148 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00172 Car-Chr8 1340931 1341495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00172 - - cam:101503027 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00172 08 1340931 1341495 Car08g00172 08 1340931 1341495 ECH
Car08g00172 08 1340931 1341495 Car06g00436 06 4474804 4475872 PCT