Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00169 ATGGACGCGAGCATTATTGTATACCTAATAGTAATATCTATTCTACTATCTTTCACTCCCTCAACTGCAGAACCTCTAGCTCCTGCATTCTTCGTCATCGGAGACTCCTCCGTCGATTCCGGAACCAACAATTTTCTTGGCACTTTTGCCCGCGCCGATCACCCTCCTTATGGAAGAGATTTTGACACTCATCAACCTACCGGAAGATTCTCCAATGGAAGAATACCCGTCGATTTTCTTGCTCTGCGCCTTGGACTTCCTTTTGTGCCAAGTTATCTTGGTCAGAACGGAGCTGTGGAGGATATGATTCATGGTGTGAATTACGCATCTGCCGGCGCAGGCATTATTGCATCAAGTGGCTCTGAATTGGGTCAGCATATTTCCTTCACTCAGCAAATTCAACAATTTACTGACACATTTCAGCAGTTTATATTAACTATGGGAGAGGATAATGCAACTACTCTCATTTCCAATTCCATCCTTTATATCTCTATTGGAATCAATGACTACATTCATTACTATTTGCTCAATGTATCCAATGTCAATAATTTGTACCTTCCATGGCACTTCAACCAGTTTTTAGCATCTTCACTTAGGCGAGAATTAAAGAACTTGTACAACTTAAATGTTAGGAAAATTGTGGTAATGGGACTTGCCCCAATTGGTTGTGCCCCTCACTACTTGTGGGAGTATGGTACCGATAATGGAGAATGTGTTGAGCAGATAAATGACATGGCCATTGAATTTAACTTTCTCATGAGACACATCGTTGAAAAACTTGCTGAGGAGCTCCGTGATGCCAATATCATCTTCTGTGACGTGTACGAAGGTTCCATGGATATTTTAAAGAATCATGATCAATATGGTTTTAACATCACATCCGAGGCTTGCTGTGGATTTGGGAAGTACAAGGGTTGGTTCATGTGTTTATCGCCGGAAATGGCGTGCAGTAATGCTTCCAACTATATCTGGTGGGATCAGTTCCATCCAACTGATACAGTGAATGCAATTCTGGCAGACAATATATGGAATGGTCAGCACACTAAAATGTGTTATCCTATGCACTTGCAGGACATGGTAATTCAGAAGGCAAAATAA 1098 0.4153 MDASIIVYLIVISILLSFTPSTAEPLAPAFFVIGDSSVDSGTNNFLGTFARADHPPYGRDFDTHQPTGRFSNGRIPVDFLALRLGLPFVPSYLGQNGAVEDMIHGVNYASAGAGIIASSGSELGQHISFTQQIQQFTDTFQQFILTMGEDNATTLISNSILYISIGINDYIHYYLLNVSNVNNLYLPWHFNQFLASSLRRELKNLYNLNVRKIVVMGLAPIGCAPHYLWEYGTDNGECVEQINDMAIEFNFLMRHIVEKLAEELRDANIIFCDVYEGSMDILKNHDQYGFNITSEACCGFGKYKGWFMCLSPEMACSNASNYIWWDQFHPTDTVNAILADNIWNGQHTKMCYPMHLQDMVIQKAK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00169 365 PANTHER OS02G0290900 PROTEIN 22 361 - -
Car08g00169 365 CDD SGNH_plant_lipase_like 28 345 IPR035669 -
Car08g00169 365 SUPERFAMILY SGNH hydrolase 102 344 - -
Car08g00169 365 Pfam GDSL-like Lipase/Acylhydrolase 31 341 IPR001087 GO:0016788
Car08g00169 365 Gene3D SGNH hydrolase 20 348 IPR036514 -
Car08g00169 365 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 22 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00169 Car-Chr8 1318923 1320936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00169 25 360 Acyl Lipid Metabolism Gene Families AT4G10950 69.643 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00169 - - pvu:PHAVU_002G165200g 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00169 08 1318923 1320936 Car08g00169 08 1318923 1320936 ECH