Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00031 ATGAAAATCCGATCGGTATTCGACGGCGGCGAATTGAGAAGTGAATTCGAAAAAAATGGTATCGATTCAAAGTTCGTTCCAATTATATGGAAGCACCTCTTTCTCACTCTCCGAAACACTAACATTAAATCCAATTCTGATTCCGATTGGGAATGGGAGAAATACGTTCCTTCTTTGCCTTGTTCAGCCTATTCCTTCCTCCGTTCCAAGTTCAAAACCCCTCTCTCTTCTTCACTCCACTCCGTTTTCCACTCTTCTGATAATGTCACATCCAAGCTCCTCATCAAACTCACTAATGGAGCTTTTGTGGAGGCTGTGATTATGAGATACGATACTCGTTTGGGTAAATATGGTGGTAAACCTCGTCCTGGTGGTCTTAGAGCTACTTTGTGTATATCTTCTCAGGTAGGATGCAAAATGGGTTGCAAGTTCTGTGCAACTGGAACTATGGGATTCAAAAGTAACTTATCATCTGGAGAAATTGTGGAGCAGTTGGTTCATGCTTCTAGTTTTGCACAAATCCGTAATGTTGTCTTCATGGGAATGGGAGAGCCTTTGAACAACTATTCTGCTGTGGTAGAATCTGTTCGTATCATGACTGGGTCACCATTCCAATTGTCATTGAAAAGGATTACCGTCTCAACGGTTGGCATCATTCATGCTATCAACAAGCTTCATAATGATGTGCCTGGTTTGAACTTGGCAGTCTCACTACATGCACCAGCCCAAGACATCCGATGCCAGATAATGCCCGCTGCCCGTGCTTTCCCTTTGGAAAAACTTATGGATTCACTGCAAGAATATCAAAGGAAAAGGTGA 819 0.4274 MKIRSVFDGGELRSEFEKNGIDSKFVPIIWKHLFLTLRNTNIKSNSDSDWEWEKYVPSLPCSAYSFLRSKFKTPLSSSLHSVFHSSDNVTSKLLIKLTNGAFVEAVIMRYDTRLGKYGGKPRPGGLRATLCISSQVGCKMGCKFCATGTMGFKSNLSSGEIVEQLVHASSFAQIRNVVFMGMGEPLNNYSAVVESVRIMTGSPFQLSLKRITVSTVGIIHAINKLHNDVPGLNLAVSLHAPAQDIRCQIMPAARAFPLEKLMDSLQEYQRKR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00031 272 Gene3D Aldolase class I 75 272 IPR013785 -
Car08g00031 272 Pfam 4Fe-4S single cluster domain 137 222 - -
Car08g00031 272 Pfam Radical SAM superfamily 133 249 IPR007197 GO:0003824|GO:0051536
Car08g00031 272 SUPERFAMILY Radical SAM enzymes 126 201 - -
Car08g00031 272 SFLD Radical SAM 133 244 IPR007197 GO:0003824|GO:0051536
Car08g00031 272 PANTHER 23S RRNA METHYLTRANSFERASE 3 271 IPR040072 -
Car08g00031 272 PANTHER RADICAL SAM SUPERFAMILY PROTEIN 3 271 - -
Car08g00031 272 ProSiteProfiles Radical SAM core domain profile. 124 272 IPR007197 GO:0003824|GO:0051536
Car08g00031 272 CDD Radical_SAM 137 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00031 Car-Chr8 288072 292081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00031 - - ccaj:109814608 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00031 08 288072 292081 Car08g00031 08 288072 292081 ECH