Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00025 AtgtcttgtttgatttgtgtgtgtttgttatttgttGTGCTCCTCCAATGTCCTATCTCATCCCTCTCAACAAACTCCGAAGGAAACGCTCTTCATGCTTTGAGAAGCAGACTTTCTGATCCCAACAACGTCCTTCAGAGCTGGGACCCAACTCTTGTTAACTCATGTACTTGGTTCCACGTTACCTGCGATTCCAACAATCACGTTATTCGcttAGACTTGGGCAATTCTAACATATCTGGATCTTTGGGACCCGAATTGGCCCAACTAACCCACCTCCAATACCTGGAGTTGTATAGCAATAACATTAACGGAAAGATTCCTGAAGAGTTAGGAAACTTAAAGAACCTTATTAGTATGGATTTATATGATAACAAACTTGAAGGAAATATTCCAAACTCCTTTGCCAACTTGAATTCACTCAAATTCCTACGGCTAAACAACAACAAGCTCACAGGATCCATCCCAAGAGAACTCACCCGTCTTCAAAATCTCAAAATCATTGATGTTTCCAATAATGACCTCTGTGGAACAATACCAGTAGATGGCAACTTCGGATCTTTCCCACCGGAAAGTTTTGAAAATAACAGACTCAACGGTCCAGAACTGAAAGGACTGGTTCCTTATGATTTTGGATGCTAA 642 0.391 MSCLICVCLLFVVLLQCPISSLSTNSEGNALHALRSRLSDPNNVLQSWDPTLVNSCTWFHVTCDSNNHVIRLDLGNSNISGSLGPELAQLTHLQYLELYSNNINGKIPEELGNLKNLISMDLYDNKLEGNIPNSFANLNSLKFLRLNNNKLTGSIPRELTRLQNLKIIDVSNNDLCGTIPVDGNFGSFPPESFENNRLNGPELKGLVPYDFGC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00025 213 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 9 210 - -
Car08g00025 213 SUPERFAMILY L domain-like 24 201 - -
Car08g00025 213 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Car08g00025 213 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 9 210 - -
Car08g00025 213 Gene3D Ribonuclease Inhibitor 23 205 IPR032675 -
Car08g00025 213 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Car08g00025 213 Pfam Leucine Rich Repeat 164 195 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00025 Car-Chr8 253405 255638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00025 23 196 Receptor kinase-like Gene Family AT1G34210 62.069 5.37e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00025 - - gmx:100816279 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00025 08 253405 255638 Car08g00025 08 253405 255638 ECH
Car08g00025 08 253405 255638 Car04g01428 04 14551649 14555334 PCT