Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00019 ATGAGTTTGGATTCGTTTCGTTCCTCCTCAGCCCCTAATTCCAAACGAACTCTCTCTTTCTCTAATTCAGCATCTTCCATTCGATCCAATGATAATAACAGTGCTAACAACAAGAGGAAGAAGATGAAGACCACAGCCACCAACCAGAAAACCTTAGGCGTCGCCTGGGGCTCAAATTCCTCCTCCTCCTCCCGAAAGCCTCCCTTTTCCGATTTCGGCAGTTATATGACTGAGAAGAATCGGAAACTACACAATCAATTCAACGCCGAAGCTTCCACGTCTTCCTTTAGTGCCTCTACTTCTGGGAAGCCTATATTCGCCGGAGTTTCAATTTTTGTTGATGGTTTCACGGTTCCCTCCAGCCAGGAACTGCGGGGCTACATGTTAAAGTATGGTGGAAGATTTGAGAATTATTTCTCTAGGCATCGTGTAACACATATTATCTGTACCAATCTTCCTGACAGTAAAGTTAAGAACCTCAGAGCTTTCAGTGCAGGGCTTCCAGTGGTAAAACCAACTTGGATTTTAGATTCAGTTGCATCTAATAGACTCTTGACCTGGGTGCCTTATCAACTTGAACAGCTTCCTAATAACCAACCAAAACTGTCGGCCTTCTTCTCATTGAGAAATAGCAAAATGTCAGAGGATACTTTTACAAATGCCCTTTGTCAAGTAGAGCCAGACATTGAAGATTCATCTGCTAGAGTTGGCAACTCAAAGGATAGATATTCATCCGATGTTGCAAAGGTGGTTGAACCTAGCTGGCAAATCACTATCGAAGCTGATGATGTTGTCTCTGAGAATACTGATGCAATTATGATGGAAGAGCAGCTGACTAGTGTTGGAGTTAAATGTGATGAAGAAGATCCTGTAGGAGGAAGCAATGATGCCGCTAAAGATGTGATGAACTTCCAAGGTGAACTTAAACCTAATAATGAAGAACCTTCTACATCAGTTACTAGCCTCTGCTCAAATGACCAGAATGTAAACGAAATTGCAAGTTCTTCCTCCACCAGGCCTTCTAAACAGTGTCATTCAACTCTTTCAGATCCTAATTTTGTGGAAAATTATTTCAAGAGCTCACGGCTCCACTTTATTGGAACCTGGAGAAATCGGTACCGAAAGCGTTTTCCCATCCCGTCTACTGGGTTTGACAATGAAATTTCTAACATTAATGCCTCTACGGTTTCTGGGAATGCAGTCGTCATCCATGTTGACATGGATTGCTTTTTTGTCTCAGTGGTAATCAGAAACCACCCTGAATTGTTGGACAAGCCTGTAGCTGTATGCCACTCGAATAATTCTAAGGGAACTGCTGAGATTTCCTCTGCAAACTACCCAGCTCGTAGTTATGGTATTAGGGCTGGTATGTTTGTTCGAGATGCCAAGGCTCTTTGTCCCCACCTTGTTATCTTTCCATACAACTTTGAAGCTTACGAGGAAGTAGCTGATCAATTTTATAGTATATTGCATCGATGTTGCAACAAAGTGCAGGCTGTAAGCTGTGATGAAGCATTTTTAGATGTCACCCATTCAAAGGTTGAAGATCCTGAACTTTTAGCATCATCCATTAGGAAAGAGATCTATGAAACCACTGGATGTACAGCCAGTGCTGGCATAGCTGGAAACATGCTTATGGCTCGTATTGCTACTAGAACTGCTAAACCAGACGGTCAATATCATATAACTCCAGAAAGGGTTGAAGATCATTTAAGTCAACTCCCAATTAATGCACTTCCTGGAGTAGGGCATGTTTTACAGGAAAAGTTGAAGACGCAGAATGTTCATACGTGCGGACAGTTGATGATGATTTCCAAGGTCTCACTGCAGAAGGACTATGGAATGAAGACAGGAGAAATGCTGTGGAATTATAGCAGAGGAATTGATAACCGGTTAGTTGGGGACTTTCAGGAATGTAAGTCTATTGGTGCTGATGTAAATTGGGGTGTGAGGTTCAAAGATATGAAAGATTGTGAGAAATTCTTAACAAGCCTTTGCAAGGAAGTCTCGTTAAGATTGCAATCTTGTGGTATGCAAGGGCGCACTTTCTCTCTCAAGATAAAAAAGAAAAGAAAAGATGCTGATGAACCGGCAAAGTTTATGGGTTGTGGAGACTGTGAAAATTTGAGTCACTCTGTAACGATTCCTCTTGCCACTGATAATGTGGAAGTACTCCAAAGGATAGTAAAGCAGCTTTTTGGAAATTTTTACATAGATGTCAAGGAGATTCGAGGTATTGGCATGCACGTTTCCAGACTTGAAAGTAGTGAGACCTCAAAGCAAGGGGCAGAAAAGTATAATTTGAAATCATGGTTCACTTCAGGATCTGCAAGTATGGAAAAACAGAAACATCCTATTGGTAATGGTCATGACAAGCAGAATATGGATGGCACTTCCGTTCTTGAATCTAGTGCTTTGCAAGGATCTTCAGTTCAAATGGACAATAACATACAAGATAACCAAGCTAGTGCTGACCGAATTTCGACACCACCTCCTTTGTGTCACCTTGATGCGGAAGTTATAAGGAATCTTCCCCCAGAAGTATTTTCAGAATTAAATGAAATTTATGGAGGGAAGTTAGTTGATTATATTGCTAAAGGGGAAGGCATAAGTGAGAGTTCTAGCTCTTTACGAAACTCGCTTTTGGAACAAGAAGCAATAAACAAGAAAGAGGAGCTTTTAGATGTTGAGCCGATTCCTCAAAAAAATCCATTAACTAAGATTGAGGCAATGCAAAATGAGGCAGAAGGAGGTGAAGCTGTACCTGATTCAGGGTCTGGACCCTCTTTTAACGTTACTCGCAATTCAAGTTTTGAAAAAGATGATTTATTGCCTTCTTCTTTAAGTCAAGTTGATGGTTCCGTCTTACGAGAATTGCCTGAGGATTTGAAAGCTGTCATTGTTCAGCAGCTTCCTGCACACAGGAGACAGGAGATTTGCTCCAATGTTGCTCTAGTCCCTCCTAATGAAAACCTTCAGGTGGCATTAGGCGTCAAGAATTCCGAGAATCCTGGATCAACTCATGTTTTGAATGAAAGTCTTTGGGCTGGGAATCCTCCAAAATGGGTAGAGAAGTTTAAAATCAGCAGTTGCTTAATATTAAAGAAACTGGCAGAAATGTATTATAAGTCAGGGTTGACTAGCACATTATCATCAGTTTTGTACCAAATTATATCTGAATTCCACCAGCTAAATCTTGCTCATCAGATATCTGATGACTCTGTTAACATCACGTGTGAGCTACTGAAGCAGTATATCAAAGTGAAGATAGGAAAAGATATTGAAGAGATTTATATTTGTTTTCGGCTTCTGAAGAGGTTTGCAGCTAAATCACATTTTTTCCTACAAGTGTATAATGGTGTATTTCCATACCTTCAGGAAGCTGTTGATGACAATTATGGAGGAAGTTTGTTAATAACTCGATAG 3426 0.4078 MSLDSFRSSSAPNSKRTLSFSNSASSIRSNDNNSANNKRKKMKTTATNQKTLGVAWGSNSSSSSRKPPFSDFGSYMTEKNRKLHNQFNAEASTSSFSASTSGKPIFAGVSIFVDGFTVPSSQELRGYMLKYGGRFENYFSRHRVTHIICTNLPDSKVKNLRAFSAGLPVVKPTWILDSVASNRLLTWVPYQLEQLPNNQPKLSAFFSLRNSKMSEDTFTNALCQVEPDIEDSSARVGNSKDRYSSDVAKVVEPSWQITIEADDVVSENTDAIMMEEQLTSVGVKCDEEDPVGGSNDAAKDVMNFQGELKPNNEEPSTSVTSLCSNDQNVNEIASSSSTRPSKQCHSTLSDPNFVENYFKSSRLHFIGTWRNRYRKRFPIPSTGFDNEISNINASTVSGNAVVIHVDMDCFFVSVVIRNHPELLDKPVAVCHSNNSKGTAEISSANYPARSYGIRAGMFVRDAKALCPHLVIFPYNFEAYEEVADQFYSILHRCCNKVQAVSCDEAFLDVTHSKVEDPELLASSIRKEIYETTGCTASAGIAGNMLMARIATRTAKPDGQYHITPERVEDHLSQLPINALPGVGHVLQEKLKTQNVHTCGQLMMISKVSLQKDYGMKTGEMLWNYSRGIDNRLVGDFQECKSIGADVNWGVRFKDMKDCEKFLTSLCKEVSLRLQSCGMQGRTFSLKIKKKRKDADEPAKFMGCGDCENLSHSVTIPLATDNVEVLQRIVKQLFGNFYIDVKEIRGIGMHVSRLESSETSKQGAEKYNLKSWFTSGSASMEKQKHPIGNGHDKQNMDGTSVLESSALQGSSVQMDNNIQDNQASADRISTPPPLCHLDAEVIRNLPPEVFSELNEIYGGKLVDYIAKGEGISESSSSLRNSLLEQEAINKKEELLDVEPIPQKNPLTKIEAMQNEAEGGEAVPDSGSGPSFNVTRNSSFEKDDLLPSSLSQVDGSVLRELPEDLKAVIVQQLPAHRRQEICSNVALVPPNENLQVALGVKNSENPGSTHVLNESLWAGNPPKWVEKFKISSCLILKKLAEMYYKSGLTSTLSSVLYQIISEFHQLNLAHQISDDSVNITCELLKQYIKVKIGKDIEEIYICFRLLKRFAAKSHFFLQVYNGVFPYLQEAVDDNYGGSLLITR 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00019 1141 Gene3D - 638 761 IPR036775 GO:0003684|GO:0006281
Car08g00019 1141 SUPERFAMILY DNA/RNA polymerases 398 633 IPR043502 -
Car08g00019 1141 PANTHER DNA REPAIR PROTEIN REV1 43 1135 - -
Car08g00019 1141 ProSiteProfiles UmuC domain profile. 402 583 IPR001126 GO:0006281
Car08g00019 1141 CDD PolY_Rev1 353 753 - -
Car08g00019 1141 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 638 751 IPR036775 GO:0003684|GO:0006281
Car08g00019 1141 MobiDBLite consensus disorder prediction 1 75 - -
Car08g00019 1141 MobiDBLite consensus disorder prediction 1 70 - -
Car08g00019 1141 Gene3D - 419 473 - -
Car08g00019 1141 Gene3D - 402 564 IPR043128 -
Car08g00019 1141 PIRSF REV1 21 1134 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
Car08g00019 1141 Pfam impB/mucB/samB family 405 551 IPR001126 GO:0006281
Car08g00019 1141 Pfam impB/mucB/samB family C-terminal domain 640 761 IPR017961 GO:0003684|GO:0006281
Car08g00019 1141 CDD BRCT_Rev1 105 192 - -
Car08g00019 1141 Pfam BRCT domain, a BRCA1 C-terminus domain 103 190 IPR001357 -
Car08g00019 1141 Gene3D - 351 380 - -
Car08g00019 1141 SMART BRCT_7 103 182 IPR001357 -
Car08g00019 1141 Gene3D - 574 628 - -
Car08g00019 1141 Gene3D BRCT domain 95 192 IPR036420 -
Car08g00019 1141 Hamap DNA polymerase IV [dinB]. 399 768 IPR022880 GO:0003887
Car08g00019 1141 ProSiteProfiles BRCT domain profile. 101 192 IPR001357 -
Car08g00019 1141 SUPERFAMILY BRCT domain 64 193 IPR036420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00019 K03515 - gmx:100778409 1649.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00019 08 215068 230464 Car08g00019 08 215068 230464 ECH