Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00010 ATGAACAACAAAATCTTTTTATATTTTGATTTATTATTATTAATATTGAATAAGAATTGGATTGCAGTTGTTTGTTGCTCGAAATTGAAGGACACAGAATGGATTTCAAGGCAAGATCCGTACGTTTGCTTGGAATACGGCAGCACCAAATTCCGAACAAGAACTTGCACCGACGGTGGAAAAAACCCTTTATTTCATGAGAAGTTCACATTTCCCCTTATTGAAGGTCTTCGTGAGATCAATGTCATCGTTTGGAACAGCAATACCCTCACCTTTGATGATTTCATCGGCACCGGAAAGATTCAATTGCACAAAGTTCTCTCTCAAGGTTTTGATGACTCTGCTTGGCCACTTCAAACCAAAACTGGCAGATACGCTGGCGAAGTCAAACTCATTTTGCATTATACTCACCAACAGAACTCCGCCTCAAGCCACCATACTCCTCCTCCCTACGCCTATATGCCAACACAATATAATTCTCCTCCTCCTCCTTCTTCCTACTACCCACAACCACAACCACACTCTAATTCAGCTCCTTTCCATCCACCACCCGCTTACCCTCCTTATTCTTCACAATATTCTTCTCCATATCCACCACCACCCTCATCCTATTCATACCCACCTCCATCTTCATCATCACCATACCCTCCTGGACCACACTCCTATCCACCATCTTCATACCCTCCTCCACCTGCAGCTTATCCTCCAAACGCTCCGGGAATTTACCCTCCACCACCATACTGA 744 0.4368 MNNKIFLYFDLLLLILNKNWIAVVCCSKLKDTEWISRQDPYVCLEYGSTKFRTRTCTDGGKNPLFHEKFTFPLIEGLREINVIVWNSNTLTFDDFIGTGKIQLHKVLSQGFDDSAWPLQTKTGRYAGEVKLILHYTHQQNSASSHHTPPPYAYMPTQYNSPPPPSSYYPQPQPHSNSAPFHPPPAYPPYSSQYSSPYPPPPSSYSYPPPSSSSPYPPGPHSYPPSSYPPPPAAYPPNAPGIYPPPPY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00010 247 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 22 247 - -
Car08g00010 247 SMART C2_3c 10 115 IPR000008 -
Car08g00010 247 CDD C2 23 116 - -
Car08g00010 247 Pfam C2 domain 22 109 IPR000008 -
Car08g00010 247 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
Car08g00010 247 Gene3D C2 domain 20 150 IPR035892 -
Car08g00010 247 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 21 153 IPR035892 -
Car08g00010 247 MobiDBLite consensus disorder prediction 161 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00010 Car-Chr8 167319 170121 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00010 - - gmx:100778230 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00010 08 167319 170121 Car08g00010 08 167319 170121 ECH