Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00009 ATGATGGAGGATGATGAACCTTTAACCCCGGGGGGGAGGCTTTTCCTGCAGCCACAGATGAACCAAATAATACACTGCGTATTAGGTCTGAAGAACCCAATAGATGTTGAATCGGTAAAGTTCCAAGTGGAGAACTCAGTTATGCTACAACACCCGAGGTTCTCAAGTGTGATGGTTCGTGACCATAGAGGCATTGAGCACTGGCGTCCAACTAAAATAGACATCGACAGACACCTACTGGTGATACACAATCCACTCCCCACTTTCTCATCAGACGACCACCAATCAGCCATATGCGACTATCTATCAGATTTATCCACCTCATCCACACTCAGCATGGATAAGCCTCTTTGGGAGATGCATATCTTGATACCACACAAGTGCGTCATATTTCGTATACATCACTCACTAGGTGATGGGATTTCTCTCATGTCTATGCTCCTCGCCAGTTGTAGGAAGCTTCAAGATCCCCACTCCCTTCCAACCATATCTCTTCCCACTAAACCTCCCACCAATTTCTTCATCCGCTTCTACAATCTCCTCGTTTCCCTCTTCTATTCTTTTATATATTTCTTACAATTCATCCTCCGCTGTCTCTGGATTCGTGACCGCAAAACCGCCATATCCGGCGGCTCCGGTGTTGAACTCTGGCCCAGGAAGATGGCCACTGCTACCTTTGCATTGAATGACATGAAGACAGTCAAAGCTGCTGTTCCTAACGCGACCATAAATGACGTTCTATTTGCAGTTATATCATCTGGGATATCACGATATCTTGACTTCAGAAAACCTAATGGGCTGCGAGACGGTGTTCAGCTGACAGGGTTAGCTATGGTTAACTTAAGGAAACAGCCAGGATTGCAGGAACTGTCTAATTTGATGAGAAACAATTCAGGGGCAAGGTGGGGCAACAAATTTGGTATGATCCTGCTGCCTATATATTACCACAGAAGCAACAGTTCAGAACCTCTAGAGTATTTGAAGAGAGCTAAAGTAATGATTGACAGAAAGAAACAATCCTTGGAGTCTCATTTGTCCTACAAAATTGGAGATTTTGTAATGTCCACTCTTGGTGCAAAGTTTGCTAGCATGCTAAATTATCGGATACTCTGCAACACTACCTTTACGATCTCAAATGTGGTTGGCCCACAAGAGGAGATTATGATTGGAGGCAATCCTGTAACGTACTTAAGGGCAAATAATTCTGCCTTGCCTCATGCACTTATTTTGAATATGGTGAGCTATGCTGGAAAGGCAGACATGCAAGTGCAGGTGGCTAAAGATATCATTCCCGATCCTGAGTTTCTTGCCAAGTGCTTTGAAGATGCATTACTTGAAATGAAGGAGCAGGTTACAGCCAAAATCTGA 1368 0.4415 MMEDDEPLTPGGRLFLQPQMNQIIHCVLGLKNPIDVESVKFQVENSVMLQHPRFSSVMVRDHRGIEHWRPTKIDIDRHLLVIHNPLPTFSSDDHQSAICDYLSDLSTSSTLSMDKPLWEMHILIPHKCVIFRIHHSLGDGISLMSMLLASCRKLQDPHSLPTISLPTKPPTNFFIRFYNLLVSLFYSFIYFLQFILRCLWIRDRKTAISGGSGVELWPRKMATATFALNDMKTVKAAVPNATINDVLFAVISSGISRYLDFRKPNGLRDGVQLTGLAMVNLRKQPGLQELSNLMRNNSGARWGNKFGMILLPIYYHRSNSSEPLEYLKRAKVMIDRKKQSLESHLSYKIGDFVMSTLGAKFASMLNYRILCNTTFTISNVVGPQEEIMIGGNPVTYLRANNSALPHALILNMVSYAGKADMQVQVAKDIIPDPEFLAKCFEDALLEMKEQVTAKI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00009 455 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 68 165 IPR004255 GO:0004144|GO:0045017
Car08g00009 455 PANTHER O-ACYLTRANSFERASE WSD1-LIKE ISOFORM X1 3 451 - -
Car08g00009 455 Pfam WS/DGAT C-terminal domain 302 448 IPR009721 GO:0004144
Car08g00009 455 SUPERFAMILY CoA-dependent acyltransferases 3 156 - -
Car08g00009 455 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 3 451 IPR045034 GO:0008374|GO:0045017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g00009 Car-Chr8 162065 164627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g00009 4 451 Acyl Lipid Metabolism Gene Families AT5G53390 35.146 1.30e-85 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00009 - - aprc:113868708 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00009 08 162065 164627 Car08g00009 08 162065 164627 ECH