Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03422 ATGACAAAGACTCATCCTTCCTTCACCCCAGACAAATCGACCTACCACATCTTGCTCACCCAATCATGCAAATCCACCGATACCACCCTTTCCCAAATTCATCAAACCCTAAACTTGATGGTTTCTGATGGCGTGAGTCCTGATAAAGTTACTGTTGATTTAGCTGTCCGATCACTTTGTTCCGCTGGTCGAATGGACGAAGCTGTTGAATTGATCAAAGAGTTGTCTTCCAAGCATTGCAGTCCTGATATTTACACTTTCAATTTCCTTGTTAAGCATCTCTGTAAGTGCCTAACATTGAGCACTCTCTATAGTTTCATTATTGAAATGCGTAGCAAATTTGGCGTCAAACCCGATCTTGTTACTTTTACAATTTTGATCGATAATGTATGTAATGCCAAGAACTTGCGTGAGACTTTGAGTTTGATGAGTGTTCTCGACGAGGAAGGCTTTAAGTTAGATTGCTATGCTTACAATACAATTATGAAAGGTTATTGTAAGATGGGTAGAGGAAATGAAGCAATTGAGGTTTATAATAAAATGAAGGAGGCCGGGGTGGAGCCCGATCTTATCACTTATAACACTTTGATTTATGGGTTATCAAAATCCGGCCGGGTAATGGAAGCTAAGAAGTTATTGCGTGTTATGGCCGAAAAGGGTCATTTCCCTGATGAGGTAACTTATACCTCTCTGATGAATGGATTGTGCAGGAAAGGGGAGATCTTGTCTGCAATTGCGTTGTTGGAAGAAATGGAAGCGATAGGGTGCAGTCCAAATTCGTGCACATATAACACGCTGCTACATGGGCTGTGCAAATCTAGGTTGTTTGACAAGGCCATGGAATTGTATGGTGAGATGAAATCGGGTTGTCTGAAGCTTGAAATGGCTTCTTATGCTACGTTTGTCAGGGCACTTTGTAGGGCTGAAAGCAAAAGAACAAGGACTCAAAATTGGAGAGCACATTTAATTGGAGGTTTCTGTCAATACTGGCAAGGATGCAACTTGCGAGAGCCTAACTCAATACAAGTGCATTTAAAAGCTGCTAATACAATTTTTGTAGGTACTTGGTTGGTAGTATACTTTTCCCAATTTTTCTtgcctaggatgagaggtgctttcggccaaattattcgcaatattgtaggtggtgatagaggtggtgatggtgttgagagaattccaccaacagcatcaaatagacgacgaaacgaagcaaatcgtcaaattaggcatcgtcgtcgaagacaagacatccatgatgatgtccctgagcctcagatggaggaggatgtcactgagcctcagatggaggaccatgtccctgagCCTCAGTTGGAGGAGGATGTCCCTGAGCCTCAGATGGAGGAGGATGTCACTGAGCCTCAGATGGAGGACCATGTCCCTGAGCCTCAGTTGGAGGAGGATGTCCCTGAGCCTCAGATGGAGGAGGATGTCAGTGAGCCTCAGATGGAGGAGGATGTCAGTGAGCCTCAGATGGAGGAGGATGTCAGTGAGCCTCAGATGGAGGAGGATGTCAGTGAGCCTCAGATGGAGGAGGATGTCAGTGAGCCTCAGATGGAGGAGGATGTCAGTGAGCCTCAGATGGAGGAGGATGTCAGTGAGCCTCAGATGGaggaggatgtcagtgagcctcagatggaggaggatgtcactgagcctcagatggaggaccatgtccctgagcctcagttggaggaggatgtccctgagcctcagatggaacatgctgatgatgctggattccccggaggacctatgttgagacatgtgttgacacagtatgagcaccacgtggctcggcgactatgggaaggagagGGGAAGCACATTTCATTTGATTCTTCTTCTCTTCACTCAATTCAATCGCCTCTAAACTCTCTCTCTGGTTATCGATTCAATATCATGGCCTCTTCTCATTGCACTCGACGTCTTTTCTTCCTCTCTTCATTCAAATCATTTCTCAGACCTAACAACCATTCTCCTGCTTCAATAATGCCGCCCCGTCGATTCTCACCCTTTCTCAGAACTATTGTATACCAGCTTGGAAGTGTTGAGTCACTTTTGCCTTTACATAGTATTGTGGCCACTGCTAGAATGGTATCATTTCTTAGCATTGATTCAAGGAATTGTCAAGCTTTTTCACAAGTTACTCTTTCCTGCAACCATCCTGGACCCTAG 2199 0.3506 MTKTHPSFTPDKSTYHILLTQSCKSTDTTLSQIHQTLNLMVSDGVSPDKVTVDLAVRSLCSAGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVKPDLVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAGVEPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSAIALLEEMEAIGCSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKLEMASYATFVRALCRAESKRTRTQNWRAHLIGGFCQYWQGCNLREPNSIQVHLKAANTIFVGTWLVVYFSQFFLPRMRGAFGQIIRNIVGGDRGGDGVERIPPTASNRRRNEANRQIRHRRRRQDIHDDVPEPQMEEDVTEPQMEDHVPEPQLEEDVPEPQMEEDVTEPQMEDHVPEPQLEEDVPEPQMEEDVSEPQMEEDVSEPQMEEDVSEPQMEEDVSEPQMEEDVSEPQMEEDVSEPQMEEDVSEPQMEEDVSEPQMEEDVTEPQMEDHVPEPQLEEDVPEPQMEHADDAGFPGGPMLRHVLTQYEHHVARRLWEGEGKHISFDSSSLHSIQSPLNSLSGYRFNIMASSHCTRRLFFLSSFKSFLRPNNHSPASIMPPRRFSPFLRTIVYQLGSVESLLPLHSIVATARMVSFLSIDSRNCQAFSQVTLSCNHPGP 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03422 732 MobiDBLite consensus disorder prediction 558 581 - -
Car07g03422 732 MobiDBLite consensus disorder prediction 459 473 - -
Car07g03422 732 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 189 223 IPR002885 -
Car07g03422 732 MobiDBLite consensus disorder prediction 384 588 - -
Car07g03422 732 Gene3D Tetratricopeptide repeat domain 100 204 IPR011990 GO:0005515
Car07g03422 732 Gene3D Tetratricopeptide repeat domain 205 319 IPR011990 GO:0005515
Car07g03422 732 Gene3D Tetratricopeptide repeat domain 1 99 IPR011990 GO:0005515
Car07g03422 732 TIGRFAM PPR: pentatricopeptide repeat domain 226 259 IPR002885 -
Car07g03422 732 TIGRFAM PPR: pentatricopeptide repeat domain 261 288 IPR002885 -
Car07g03422 732 TIGRFAM PPR: pentatricopeptide repeat domain 156 189 IPR002885 -
Car07g03422 732 TIGRFAM PPR: pentatricopeptide repeat domain 191 225 IPR002885 -
Car07g03422 732 TIGRFAM PPR: pentatricopeptide repeat domain 56 84 IPR002885 -
Car07g03422 732 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 48 82 IPR002885 -
Car07g03422 732 MobiDBLite consensus disorder prediction 475 557 - -
Car07g03422 732 SUPERFAMILY HCP-like 161 283 - -
Car07g03422 732 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 224 258 IPR002885 -
Car07g03422 732 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL 1 309 - -
Car07g03422 732 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 309 - -
Car07g03422 732 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 119 153 IPR002885 -
Car07g03422 732 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 259 293 IPR002885 -
Car07g03422 732 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 154 188 IPR002885 -
Car07g03422 732 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Car07g03422 732 Pfam PPR repeat family 156 202 IPR002885 -
Car07g03422 732 Pfam PPR repeat family 58 96 IPR002885 -
Car07g03422 732 Pfam PPR repeat family 223 272 IPR002885 -
Car07g03422 732 MobiDBLite consensus disorder prediction 432 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03422 Car-Chr7 62308173 62319197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03422 18 319 Glycosyltransferase AT1G05670 27.815 6.31e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03422 - - adu:107458955 482.256