Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03378 atgtgtggtcttataagCGTCTCTCTCATAACAATGGagaatgaagaagaagaagaagtgataggtgaagttgaagCGATGAAATCTGTATATGAAAGCGATTGTATCATTCTCCGTTCCATTCCTCCTCACTTTCACTTATCCCTCAAACCCAGAACCGCCGATGTTCAATCCCACCAGTTTGTAGAAGTTGTTCTTGATGTACAAGCTACCCCACAGTATCCAAAAGAACCACCTTCTGTTGCTCTTCTGGATTGCAAGGGTTTGGATCAACAGAGACAAAACTATTTATTGAATCACATTAAAACTAAAGCCAATGAGCTCTCTCCTGGCTTAATGCTTGTAGCTCTGTGTGAGGAAGCGGCAGAGAAACTCTCAGCTATGAATCATCCTGATGGTGATTGTCCATTGTGTTTATTCCCTTTGGTTCCAGAAGATCACCAAAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCACAGTGAATGTATCATAAGATGGTGGAATTGGCTTCAGAGTTCTAAACAAACAGGCTCTGCCACTTCAAATAATGCAGCTGCTCATCCTAATCATGGTAATTCTGAAAAATTGGAAGAGGGTGTTGGAAACTGCCCAGTTTGTCGCAAACCTTTTCATGCCAAAGATTTGGACCACGTGCTTGACCTAGTTGGCTCACATTCTTCAAGAGTGAGTTTGAATAATGATGAAGTCAATAACGATGAAATAATCCTTCAATCTGAGCATGAGATAATCAGAAAACAGAGGTTTGAAGCCATCTTATGTTTACAGACGGAGAACAATGGTTTGATTGAACCAAAAAAAGATTTAGTAATATTGCCCGGTATGTATCTTCCTCAACAAGTTACCGCGCCAGAGTCCACGTTGACCAAGGAACCCGACGAGATTGAGCAACACGAAAGAGATCCACCTGCAGTCGGGTCAGGAAAACATGTCAGCGGGACCTCAAATGGGTCTAGTTCTAGTGGGAACAGGAATTTCGGTGCGAGGAGGAATAGAGGACGGAGTGATCATCACTCCAGTTCGACTGCAAGACATCCAAGAAAACCCGTCCAACAGTGGGTTAGAAGAGATAATCCTTAA 1116 0.4032 MCGLISVSLITMENEEEEEVIGEVEAMKSVYESDCIILRSIPPHFHLSLKPRTADVQSHQFVEVVLDVQATPQYPKEPPSVALLDCKGLDQQRQNYLLNHIKTKANELSPGLMLVALCEEAAEKLSAMNHPDGDCPLCLFPLVPEDHQSETLPFMKLMSCFHCFHSECIIRWWNWLQSSKQTGSATSNNAAAHPNHGNSEKLEEGVGNCPVCRKPFHAKDLDHVLDLVGSHSSRVSLNNDEVNNDEIILQSEHEIIRKQRFEAILCLQTENNGLIEPKKDLVILPGMYLPQQVTAPESTLTKEPDEIEQHERDPPAVGSGKHVSGTSNGSSSSGNRNFGARRNRGRSDHHSSSTARHPRKPVQQWVRRDNP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03378 371 ProSiteProfiles Zinc finger RING-type profile. 135 213 IPR001841 -
Car07g03378 371 SUPERFAMILY RING/U-box 128 219 - -
Car07g03378 371 MobiDBLite consensus disorder prediction 301 317 - -
Car07g03378 371 ProSiteProfiles RWD domain profile. 22 128 IPR006575 GO:0005515
Car07g03378 371 Pfam RWD domain 19 124 IPR006575 GO:0005515
Car07g03378 371 SMART ring_2 135 212 IPR001841 -
Car07g03378 371 Gene3D Ubiquitin Conjugating Enzyme 10 130 IPR016135 -
Car07g03378 371 PANTHER RING FINGER PROTEIN 25 15 358 IPR039133 GO:0061630
Car07g03378 371 SUPERFAMILY UBC-like 16 125 IPR016135 -
Car07g03378 371 SMART RWD2001b 22 128 IPR006575 GO:0005515
Car07g03378 371 MobiDBLite consensus disorder prediction 294 371 - -
Car07g03378 371 MobiDBLite consensus disorder prediction 321 340 - -
Car07g03378 371 MobiDBLite consensus disorder prediction 341 355 - -
Car07g03378 371 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 227 IPR013083 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03378 K10640 - gmx:100791789 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03378 07 61891922 61896439 Car07g03378 07 61891922 61896439 ECH