Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03377 atgttcttgattcAGTGTAGAATGGTTAGTATGGCGTTGCCACTCGTCATCTCTCTTTTCAAACCTTTCACAACCACCACTCGCCTCCATTCCACACTCTTACGCCGCCGTCGTTTCACTACTACTACTACTCTCTCCGCCACCACCACTCCTCCACCTTCTTCACCTTCACCTTCTCTCTCTCACCACTCTTCTACTCACTCCAATTCTTCTCCTCACAACCTCTCTTCCCTCACTTTTCAGCAAGCCATTCAGCGCCTTCAGGAATATTGGGCTTCCGTTGGATGTTCCATTATGCAATGCAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTTCTTGGTCCAGAACCATGGAATGTTGCGTATGTGGAACCTAGCATTCGCCCTGATGATAGTCGATATGGAGAAAACCCGAATAGGCTCCAAAGACACACTCAATTTCAGGTAATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTTTCAGCTTTAGGTATTGATGTTACTGCACATGATATACGATTTGTGGAGGACAACTGGGAGAGTCCGGTTCTTGGTGCTTGGGGTTTGGGATGGGAAATCTGGATGGATGGAATGGAGATTACTCAGTTCACCTACTTTCAGCAGGCTGGAAGTCTCCAGTTATCACCAGTATCAGTAGAAATCACTTATGGCCTGGAGCGTATCCTCATGTTACTGCAGGGAGTTGATCACTTCAAGAAGATAAAATACTCTGATGGAATAACTTATGGAGAGCTGTTCTTAGAGAATGAAAAGGAAATGAGTGCATATTACTTGGAGCATGCCAGTGTCGATCATCTTCAAAAACATTTTGATTTCTTTGAGGAGGAATCTCGTCATTTACTTTCTTCAGGCCTTGCAATCCCCGCGTATGATCAGCTTCTGAAAACGTCTCACGCCTTTAATATTTTAGACTCCAGAGGCTTTGTTGGAGTAACAGAGCGTGCTCGATATTTTGGTCGCATGCGTAGTTTAGCTCGCCAGTGTGCCCAACTTTGGTTGAAGACCAGGGAGATGCTTGACTTCCCCCTTGGTTTCATCTCTGAACCTGATCATTCTGTAATGCCAACGGATGTTGTGGAGGCTGCATGTGAGAAGGTGCATGATCATGCAAGAGTATTTGTTCTCGAAATTGGGACTGAAGAGATGCCACCTCAAGATGTTGTTGATGCAAGCAAGCAACTGAAAGATTTAATATTGCAATTACTGGAACGGCAGAGGTTAAAGCATGGTGAAGTGCAGGTTTTTGGCACCGCACGGAGACTTGTGGTTTCTGTTGAAAATCTTTTAACGAAACAAACAGAACAGGAAGTTGAGGTTCGAGGTCCTCCTGTTTCGAAAGCATTTGATAATGAAGGGAATCCAACAAAGGCTGCTGAGGGTTTTTCCCGCAGATACTCTGTTCCATTGGACTCGGTATATCAAAAGGTTGATGGGAAAACAGAATATGTATATGCTCGTATAAAAGAGTCTTCAAGACATGCTTTGGAGGTTTTATCTGAAGATTTGCCTGCTACTATTGCTAAAATTTCATTTCCAAAGACAATGCGTTGGAATTCACAGGTGATGTTTAGCAGGCTTATCCGTTGGATTTTGGCCTTGCACGGAGATGTAGTGGTCCCATTTATGTTTGCTGGGGTGACGAGTGGAAACATGTCTTGTGGCCTTCGCAATACTACTTCAGCCGTTGTTCAGATAGAAAATGCAGAATCTTATTCTGTTGCAATGAAAAATGCGGGAGTCAATGTTACAGTTGAGGACCGTAAGAAAAGAATTTTAGAGCAATCTAATAGATTAGCAGAAAGTGTAAATGGCCAACTTCTGATTCCGAAAGGTTTGCTAGACGAGGTTGTAAATCTTGTTGAGGCACCTGTTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTAGAACTTCCAAAGGATCTTTTGACTATGGTTATGCAAAAACATCAGAAATATTTTGCTGTATGTGATGCTAATGGACAATTGCTGCCTTACTTTATTGCTGTTGCAAATGGAGCAATTGATGAGACTACAGTGAGGAAAGGAAATGAAGCTGTGCTTAGGGCTCGCTATGAAGATGCTAAGTTCTTTTATGAGTTGGACACTCGTAAAAGGTTTTCGGAATTCAGAGAGCAACTGAAAAATATTCTCTTTCATGAGAAGCTTGGAACCATGCTGGATAAAATGACTCGTGTGGAAAACATGGTTGCTAAGCTAAGTTGCATGTTGGATATTGATGAAGAGATGCAACAAATTATCCAGGAAGCTGCCTCACTTGCCATGTCTGATCTATCCACATCGGTTGTCACTGAGTTTACCGCACTTTCAGGAGTTATGGGCCGTCACTATGCCCTTAGAGATGGATACTCTGAGCAGACTGCAGAGGCCTTGTTTGAAATCACACTTCCTAGATTTTCTGGGGACATGCTTCCTAAAAGCGATGCTGGCATAGTTTTGGCAATTGCTGATAGATTAGATAGCCTGGTAGGTTTATTCACCGCTGGCTGTCAACCTAGTTCCACAAATGATCCATTTGGTCTGCGAAGAATCTCTTACGGTCTTGTGCAATTGCTGGTGGAAAAGAATAAGAACCTAGATTTTAAAGAGGCTCTGGAACTTGCTGCAGATGTTCAGCCAATTAAAGTAAATCCTCAAGTAATAGACGAAGTACGTCAATTTGTTACTCGAAGATTGGAGCAATTTCTGGTGGACAAGGGGGTGAGTCCAGAAGTTGTTCGTTCCATCCTTGCAGAGAGGGCTAATTTTCCCTGTCTAGCAACAAAATCTGCATATAAAATGGAAGAATTATCAAAAGGCGAGCTTTTCCCTAAAGTAGTTGAAGCGTACTCTCGGCCTACTAGAATTGTTCGAGGGAAGGAAGATGTGCTTCATTTGGAGGTGGATGAAGCTGCCTTTGAGACAAATGAAGAGAGAGTGTTGTGGAACACATTTTTGTCAGTTAAAAAGAGTATCAATCCTGGTCTTGACATCGATAATTTCATAAAAAATTCATCTCAGCTTATACAACCCCTTGATGATTTCTTTAATAATGTCTTCGTAATGGTGGATGATGCCAAGATCAGAAAAAACAGGCTAGCTCTTCTAAAAGGAATTGCTGAACTCCCTAAAGGAATTGCAGACCTTACATTATTACCAGGATTTTAA 3225 0.4229 MFLIQCRMVSMALPLVISLFKPFTTTTRLHSTLLRRRRFTTTTTLSATTTPPPSSPSPSLSHHSSTHSNSSPHNLSSLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHLQKHFDFFEEESRHLLSSGLAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTREMLDFPLGFISEPDHSVMPTDVVEAACEKVHDHARVFVLEIGTEEMPPQDVVDASKQLKDLILQLLERQRLKHGEVQVFGTARRLVVSVENLLTKQTEQEVEVRGPPVSKAFDNEGNPTKAAEGFSRRYSVPLDSVYQKVDGKTEYVYARIKESSRHALEVLSEDLPATIAKISFPKTMRWNSQVMFSRLIRWILALHGDVVVPFMFAGVTSGNMSCGLRNTTSAVVQIENAESYSVAMKNAGVNVTVEDRKKRILEQSNRLAESVNGQLLIPKGLLDEVVNLVEAPVPVLGKFKETFLELPKDLLTMVMQKHQKYFAVCDANGQLLPYFIAVANGAIDETTVRKGNEAVLRARYEDAKFFYELDTRKRFSEFREQLKNILFHEKLGTMLDKMTRVENMVAKLSCMLDIDEEMQQIIQEAASLAMSDLSTSVVTEFTALSGVMGRHYALRDGYSEQTAEALFEITLPRFSGDMLPKSDAGIVLAIADRLDSLVGLFTAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLDFKEALELAADVQPIKVNPQVIDEVRQFVTRRLEQFLVDKGVSPEVVRSILAERANFPCLATKSAYKMEELSKGELFPKVVEAYSRPTRIVRGKEDVLHLEVDEAAFETNEERVLWNTFLSVKKSINPGLDIDNFIKNSSQLIQPLDDFFNNVFVMVDDAKIRKNRLALLKGIAELPKGIADLTLLPGF 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03377 1074 Hamap Glycine--tRNA ligase beta subunit [glyS]. 390 1071 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 TIGRFAM glyQ: glycine--tRNA ligase, alpha subunit 79 363 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 MobiDBLite consensus disorder prediction 40 74 - -
Car07g03377 1074 Pfam Glycyl-tRNA synthetase alpha subunit 80 357 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 CDD GlyRS_alpha_core 79 357 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 747 1036 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 PANTHER GLYCYL-TRNA SYNTHETASE 390 1074 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 79 353 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 PRINTS Glycyl-tRNA synthetase alpha subunit signature 132 147 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 PRINTS Glycyl-tRNA synthetase alpha subunit signature 153 173 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 PRINTS Glycyl-tRNA synthetase alpha subunit signature 184 208 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 PRINTS Glycyl-tRNA synthetase alpha subunit signature 210 230 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 PRINTS Glycyl-tRNA synthetase alpha subunit signature 233 248 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 PRINTS Glycyl-tRNA synthetase alpha subunit signature 318 334 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 TIGRFAM glyS: glycine--tRNA ligase, beta subunit 392 1071 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 SUPERFAMILY Class II aaRS and biotin synthetases 79 357 IPR045864 -
Car07g03377 1074 Pfam Glycyl-tRNA synthetase beta subunit 393 937 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Car07g03377 1074 SUPERFAMILY HD-domain/PDEase-like 725 854 - -
Car07g03377 1074 MobiDBLite consensus disorder prediction 59 74 - -
Car07g03377 1074 Gene3D Class II aaRS and biotin synthetases; domain 2 282 360 - -
Car07g03377 1074 Gene3D Bira Bifunctional Protein; Domain 2 64 281 IPR045864 -
Car07g03377 1074 Hamap Glycine--tRNA ligase alpha subunit [glyQ]. 78 358 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03377 K14164 - gmx:100787365 1787.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03377 07 61865903 61880612 Car07g03377 07 61865903 61880612 ECH