Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03333 ATGGCATCATCAGATGAAGAGGGTGAGATTGTTCCGAATTATGTTGATTGTTATTGGTTTGAAAACGATAAGGCGGAGTTTGTGTCATTTTTTAGTTTGACATTATTGTGGAGCATTAACGAGGTCGAATGTGACTCGGAAACGAAAGTGTTTCTGCGTGGTACAACTGATAACGGTCTCCAGAAAATTCACAAACATATAACAGGATGGAGATTTGAACTTTCCAGTGGTCAGCCTAAGATTTCAGTGCTTTCGAGGGAGAAATACTGGATAACACTTCAGAAACCAAGAAAATGCTTCGAAACTATGATTAGGACGGTCTTGGTCACAGTTTATTGGTTGCATTTTGTGAAATGGAATCCAGAGGAATCAAGAATATCGATTTGGAACAAAATGTCGAAGGAATTTAGTTCATATGATGTTTCACCATCTGAGAGTGATGTTCTAAATCATATGACATTGATTAGAGATGCTGCTAAAAGGGACACAGATTTAACAAAATCTAAGTATTTGTTTAATTTCATAGAAAAGACATGTTCAAAGGAAGGCTTCCTTGAGGATATTTACACTACAAAGAAATTAAAATTTGTAGTTGACTCAGAGGAAGAGGAGGAGGAGCAGAATGACAAATCTGACGGAGAACTCAACGTAGATGAAGAACAAAATATTGGCTACGATACTGTTTGTGCAATTTGTGATAATGGTGGTGAAGTACTTCCTTGTGAAGGAAGATGTCTGAGATCCTTCCATGCAACCATAGAGGCTGGAAAAGATTCATATTGTGCATCTCTTGGTTACACTATTACTCAAGTTAATGCCTTTCCAAACTTCTATTGTGAAAATTGTAAATATAAGAAGCATCAATGCTTTGCATGTGGAAAATTGGGTTCATCTGATGAATCATCTAATGCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTATTACCATCTTGAATGCGCTGCAAAGCTACTCAACCCTGGCATTGACATCGAACAAATGGAAATGAGAAAGAGGATTGCCACCGATAAAACATTTGTCTGTCCACTTCATATATGTTCTCTATGCAAACAAGGTGAAAATAGAAATGTTCATGATTTGCAATTTGCGATGTGTAGACGCTGCCCCAAGGCATACCACAGGAAATGCTTGCCAAAGGAAATTTCTTTCACATTTGACTATCTGATGGGAATTGAGCAGAGGGCTTGGGATAATCTGCTTGACAAACGAATTTTGATGTATTGCTTGGATCATGAGATAGTTATGGAACTTGGAACTCCTGCTAGAAACCATCTGATATTTCCCGATAAGGAAGTCAAAAGGAAGATAAGCAGTTACAATTTATTACAAAAAGAGAAGGTTGATATTTCATCTAGGAAAAGTTTCGAAGATCTTCCTCCTAACAAGACATTGGTGCCAAAGCTAATTATAAAGCAAAAAGTTGGTCTTCAAAGTAATGGTTCTTCAAAAGTTATGGTGAAAATACGCTCTAAGCCAGATACAAATTTGTCCACTGGACCAGTCGAGCTTGACAGGACTAGAAAATATATGAAGGTTGAAACGACATCTGCGTCAAATAGGCCCTTACCGAATTCTGAAAACGGAAAGCCTTTCAAAAATGATAACTTGCAGTGTAGTCAAAGACTTCTTGAAGCTAGACCACAACAGCAAAAATCCGTTAGTAGAATTGAAGAAACAAGGTTAGCGAAACCTTTGGTAAAAAAAGTCAAAATTTCACCGGAAGTTTGGAATGCAAATATGGAAAAACGAATTTTGTTTTTAATGGAAGAAGCCACGTCTGCATCGAACTTGGAAGAATTTAAAAAGAACCGTCAAGTCTTCTCTACGAGTTCGTGTTTCACACAAACTGTATTTGATAAGACTCTTACTCAAGGAAAAGTTGAGGGTTCTGTTAAGGCTATTAAAATAGCTTTACAAAAGTTAAATGAAGGATGTAGTATTGAGGAAGCAAAAGCTATTTGTGACCCAGAAATCATTCGTCAGATTTTTATTTGGCAGAAGCAGCTCAAGGTCTATCTTGCACCTTTTCTTCATGGCATGCGATATACTTCATTTGGTCGCCATTTCACTAAAATAGACAAATTGAAGGAGATTGTTGATAGGCTTCATTGGTATGTGAAAAGTGGTGACACGGTTTTGGACTTCTGTTGCGGTGCAAATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGACTGGGAAGCTATGTTCATATAAGAACTATGATTTAATCCAAGCTAAGAACGATTTCAACTTCGAAAAGAGAGATTGGATGAGTGTCAAGGCCGAGGAATTACCCGACGGTTCTCAGCTTATCATAGGGCTGAATCCTCCTTTTGGGGTCAAGGGTTCTCTTGCTAACAAATTTATTAACAAGGCATTGACATTTAAGCCAAAACTCCTTGTACTTATTGTGCCAAAAGTAACAAAAAGACTTGACAAAAAGAAAGGTGGATATGATTTAATTTGGGAGGATGAGGAGATATGTTCAGGAAAGTCATTTTATCTACCTGGTTCAGTCGATATCCGAGACAAGCAATTGGAAGACTGGAACTTGAAGCCGCCGCCTCTTTACCTTTGGAGTCGCCCTGATTGGACTATTAGGCACATGGAAATTGCTCATGTTCATAGCCACATCAAATATGTTGTGTGCAATAATAATAATAAAGGAAAAGAAGTAACAAATTATCTTCTGGAGGAGAATCATGATTGTTATCAAAATTACCAAGGGTTACATGCACCTGATAATTTTTTAAGCATATTTGATGGTGTTCCCGATGATAATGGTGACATTGTACTAGAGCACGGTGCAAAAAGCTTTCCTTGA 2856 0.3757 MASSDEEGEIVPNYVDCYWFENDKAEFVSFFSLTLLWSINEVECDSETKVFLRGTTDNGLQKIHKHITGWRFELSSGQPKISVLSREKYWITLQKPRKCFETMIRTVLVTVYWLHFVKWNPEESRISIWNKMSKEFSSYDVSPSESDVLNHMTLIRDAAKRDTDLTKSKYLFNFIEKTCSKEGFLEDIYTTKKLKFVVDSEEEEEEQNDKSDGELNVDEEQNIGYDTVCAICDNGGEVLPCEGRCLRSFHATIEAGKDSYCASLGYTITQVNAFPNFYCENCKYKKHQCFACGKLGSSDESSNAEVFPCVTANCGHYYHLECAAKLLNPGIDIEQMEMRKRIATDKTFVCPLHICSLCKQGENRNVHDLQFAMCRRCPKAYHRKCLPKEISFTFDYLMGIEQRAWDNLLDKRILMYCLDHEIVMELGTPARNHLIFPDKEVKRKISSYNLLQKEKVDISSRKSFEDLPPNKTLVPKLIIKQKVGLQSNGSSKVMVKIRSKPDTNLSTGPVELDRTRKYMKVETTSASNRPLPNSENGKPFKNDNLQCSQRLLEARPQQQKSVSRIEETRLAKPLVKKVKISPEVWNANMEKRILFLMEEATSASNLEEFKKNRQVFSTSSCFTQTVFDKTLTQGKVEGSVKAIKIALQKLNEGCSIEEAKAICDPEIIRQIFIWQKQLKVYLAPFLHGMRYTSFGRHFTKIDKLKEIVDRLHWYVKSGDTVLDFCCGANDFSCLMKSKLEQTGKLCSYKNYDLIQAKNDFNFEKRDWMSVKAEELPDGSQLIIGLNPPFGVKGSLANKFINKALTFKPKLLVLIVPKVTKRLDKKKGGYDLIWEDEEICSGKSFYLPGSVDIRDKQLEDWNLKPPPLYLWSRPDWTIRHMEIAHVHSHIKYVVCNNNNKGKEVTNYLLEENHDCYQNYQGLHAPDNFLSIFDGVPDDNGDIVLEHGAKSFP 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03333 951 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 393 IPR013083 -
Car07g03333 951 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 691 797 IPR029063 -
Car07g03333 951 PANTHER EDM2-LIKE PROTEIN1 1 931 - -
Car07g03333 951 CDD PHD2_NSD 288 353 - -
Car07g03333 951 SMART PHD_3 288 354 IPR001965 -
Car07g03333 951 SMART PHD_3 355 421 IPR001965 -
Car07g03333 951 SMART PHD_3 228 283 IPR001965 -
Car07g03333 951 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 931 - -
Car07g03333 951 Pfam Cytosine specific DNA methyltransferase replication foci domain 39 130 IPR022702 -
Car07g03333 951 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 284 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03333 Car-Chr7 61291587 61298625 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03333 - - cam:101512524 1954.87