Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03316 ATGGCGATCTTCTGGAAGCACGTGAGGTCATCGTCGCCGATACTGCAACGCCTCAAACAGCACGTGACCGGCAGTTACTTCTTACTTTCGAGGAAATCTTTCACGACGACGGAAGGTCATCGCCCAACCATCGTTCACAAACGCAGCCTCGACATTCTTCACGATCCTTGGTTCAATAAAGGAACAGCCTTTTCCATGACAGAACGAGATCGTCTTGATCTACGAGGACTGCTTCCTCCAAATGTTGTGTCTCCCGACGTACAGATTGAGCGCTTCATGGTTGATCTGAAAAGGCTTGAAGTTCAAGCAAGAGACGGACCTTCTGATCCTAATGCGCTGGCCAAGTGGCGGATACTAAATCGCTTGCATGATAGAAATGAGACTATGTATTATAAAGTTTTGATTGCCAACATTGAGGAATATGCACCGATAGTATATACTCCAACTGTGGGTCTTGTATGTCAGAACTATAGTGGACTTTTTAGAAGGCCAAGAGGAATGTATTTCAGTGCTCAGGATCGTGGAGAAATGATGTCCATGGTCTATAACTGGCCAGCTGAGCAGGTTGATATGATTGTAGTTACTGATGGGAGCAGAATTCTGGGACTTGGAGATCTTGGAGTTCAAGGAATTGGCATTGCCATTGGGAAGCTTGATCTATATGTTGCTGCTGCTGGGATAAATCCTCAAAGGGTACTTCCCGTGATGATTGACGTTGGTACTAACAACAAAAAGTTACTTGAAGATCCCTTATATTTAGGATTACAGCAGAATCGCCTTGATGGGGATGACTATCTTGCTGTTATAGATGAATTTATGGAAGCTGTTTTTACTCGCTGGCCAAATGTGATTGTACAGTTTGAAGATTTTCAAAGTAAATGGGCTTTTAAGTTATTACAGCGGTATAGAGCTACCTACCGAATGTTTAATGATGATGTGCAGGGGACAGCTGGTGTTGCTATTGCTGGACTTCTAGGTGCTGTAAGAGCTCAAGGAAGGCCAATGATTGACTTCCCAAAGCAGAAGATAGTTGTTGCTGGTGCTGGAAGTGCTGGAATCGGCGTTCTTAATGCAGCAAGAAAAACAATGGCAAGGATGCTGGGTAATAATGAAGCTGCTTTTGAGAGTGCCAAGAGTCAATTTTGGGTTGTTGATGCAAAGGGATTAATAACTGAAGGACGTGAAAATATTGATCCAGATGCCCTTCCTTTTGCAAGAAATTTGAAAGAAATGGACCGCCAAGGACTAAGTGAAGGAGCAAGTCTTACAGAAGTGGTCAAGCAAGTGAAGCCCGATGTCCTCCTAGGACTATCTGCTGTTGGAGGATTGTTCTCAAAAGAGGTATTAGAGGCCCTGAAGGGTTCAACATCAACAAGACCAGCCATATTTGCCATGTCAAATCCAACAAAGAATGCTGAATGCACCCCTGAAGAAGCATTCTCCATTTTGGGTGACAACATTCTATTTGCAAGTGGAAGTCCATTTAATAATGTGGATATCGGAAATGGTCGTATTGGACACTGCAACCAGGGAAACAACATGTACCTGTTTCCAGGCATTGGTCTTGGAACTCTTTTGTCTGGGTCTAGGATCATATCAGATGGCATGCTACAGGCTGCTGCCGAGCGTCTGGCTGCATATATGAGTGAAGAGGAGGTCCTCAAAGGGGTTATTTTCCCTTCAATATCCAGAATTCGAGATATTACGAAGGAGGTAGCTGCTTCTGTTATAGAAGAAGCTTTGGAGGAGGATCTAGCTGAAGGATACCATGGCATGGATGCTCGAGAACTCCGTAAACTTAGTCGGGATGAAATTGTGGAATATGTGAAGAATAACATGTGGAATCCAGAGTACCCAACACTGGTTTACAGATCCTAA 1878 0.4393 MAIFWKHVRSSSPILQRLKQHVTGSYFLLSRKSFTTTEGHRPTIVHKRSLDILHDPWFNKGTAFSMTERDRLDLRGLLPPNVVSPDVQIERFMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAQDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNKKLLEDPLYLGLQQNRLDGDDYLAVIDEFMEAVFTRWPNVIVQFEDFQSKWAFKLLQRYRATYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEAAFESAKSQFWVVDAKGLITEGRENIDPDALPFARNLKEMDRQGLSEGASLTEVVKQVKPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAIFAMSNPTKNAECTPEEAFSILGDNILFASGSPFNNVDIGNGRIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQAAAERLAAYMSEEEVLKGVIFPSISRIRDITKEVAASVIEEALEEDLAEGYHGMDARELRKLSRDEIVEYVKNNMWNPEYPTLVYRS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03316 625 CDD NAD_bind_1_malic_enz 313 616 - -
Car07g03316 625 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 313 623 IPR036291 -
Car07g03316 625 SMART Malic_M_2 313 581 IPR012302 GO:0051287
Car07g03316 625 PIRSF ME 17 624 IPR001891 GO:0004470|GO:0004471
Car07g03316 625 PANTHER MALIC ENZYME 35 621 - -
Car07g03316 625 Pfam Malic enzyme, NAD binding domain 313 580 IPR012302 GO:0051287
Car07g03316 625 Pfam Malic enzyme, N-terminal domain 123 303 IPR012301 GO:0004471
Car07g03316 625 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 33 312 IPR046346 -
Car07g03316 625 ProSitePatterns Malic enzymes signature. 309 325 IPR015884 GO:0004471
Car07g03316 625 SMART malic_2 123 303 IPR012301 GO:0004471
Car07g03316 625 Gene3D - 311 625 - -
Car07g03316 625 Gene3D - 47 310 IPR037062 GO:0004471
Car07g03316 625 PANTHER MALIC ENZYME-RELATED 35 621 - -
Car07g03316 625 PRINTS Malic enzyme signature 129 153 IPR001891 GO:0004470|GO:0004471
Car07g03316 625 PRINTS Malic enzyme signature 189 218 IPR001891 GO:0004470|GO:0004471
Car07g03316 625 PRINTS Malic enzyme signature 225 247 IPR001891 GO:0004470|GO:0004471
Car07g03316 625 PRINTS Malic enzyme signature 309 325 IPR001891 GO:0004470|GO:0004471
Car07g03316 625 PRINTS Malic enzyme signature 343 359 IPR001891 GO:0004470|GO:0004471
Car07g03316 625 PRINTS Malic enzyme signature 284 302 IPR001891 GO:0004470|GO:0004471
Car07g03316 625 PRINTS Malic enzyme signature 457 473 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03316 Car-Chr7 60995321 61016559 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03316 K00028 - gmx:100799344 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03316 07 60995321 61016559 Car07g03316 07 60995321 61016559 ECH