Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03315 ATGACGACGATGGAGAGCTTGATTGGATTGGTGAACAGAATCCAGCAAGCTTGTACTAAGCTTGGTGATTATGGCGGTTCCGATAGCAACACCTTCTCTTCTCTTTGGGAAGCTCTTCCTTCCGTCGCCGTCGTCGGTGGTCAGAGTTCAGGTAAGTCTTCGGTTTTGGAGAGTATCGTTGGACGTGACTTTCTACCTAGAGGATCAGGGATTGTGACGAGGCGTCCATTGGTGTTGCAGCTTCATAAGACAGAAGATGGTGCAAATGAGTATGCTGAGTTTCTTCACAGACCAGGGAGAAAGATAACCGATTTTGCCGTAGTACGCCAGGAAATTCAGGACGAAACTGATAGAATAACGGGAAAGACAAAGCAAATATCTCCTATTCCAATTCATCTAAGCATTTATTCTCCAGATGTTGTCAATCTAACTTTGATTGATTTACCGGGGTTGACTAAAGTTGCTATAGACGGACAGTCTGAGAGTATTGTTCAAGATATTGAAAATATGGTTCGATCTTATGTTGAGAAGCCTAATTGTATCATACTGGCTATATCTCCAGCCAACCAGGACATAGCAACTTCCGATGCTATAAAACTTTCAAGGGAAGTTGATCCCTCAGGTGAGAGGACATTTGGAGTGCTGACAAAGCTGGATCTGATGGACAAAGGAACTAATGCATTGGATGTCCTTGAAGGGAGATCTTATCGTCTGCAACATCCTTGGGTTGGTATAGTAAATCGATCTCAAGCAGATATCAACAAAAATGTTGATATGATTGTTGCTAGACGCAAGGAGCTTGAGTATTTTGAGACCAGTCCTGACTATGGCCACTTAGCCAGTAAAATGGGTTCAGTATACCTTGCAAAACTTCTTTCACAGCACTTGGAGTCAGTAATTAGGGCACGGATACCTAGTATAACATCCTTGATAAATAAAAGCATTGACGAACTTGAATCAGAGATGGATCATCTTGGAAGACCAATTGCTGTTGATGCAGGGGCTCAACTATACACCATCCTTGAACTTTGCCGCAAATTTGAACGGGTATTCAAAGAGCATTTAGATGGAGGGCGGGCAGGAGGAGATAGAATATATAATGTCTTTGACAACCAGCTTCCTGCTGCTTTACGGAAGCTTCCGATTGAAAAACATCTTTCTCTTCAGAATGTGAAGAGAGTGGTGTCAGAGGCAGATGGTTACCAGCCTCACTTAATTGCCCCAGAGCAAGGATACCGACGACTGATTGAGGGGACTCTCAGTTACTTTAGAGGCCCAGCTGAAGCTTCAGTCGATGCAGTTCACTTTGTCTTGAAAGAACTTGTGAGGAAATCAATAGGTGAAACAGAGGAACTGAGACGGTTCCCTACTCTTCAAGCTGAAATATCTGCAGCTACAAGTGAGGCTCTAGAGAGGTTCCGAGAAGTGAGTAAGAAGACAACTATTCGGCTTGTGGATATGGAATCTTCGTATCTTACTGTGGATTTCTTTCGAAGACTTCCTCAAGAAATGGAGAGAGCTGGAAATCCAGCTCATCCAACTAATCCATCTAATCGAAAGTCTCCTCAAAAAATGGAGAAAGCTGGAACTCCAGCTCAACCAACTAATCCATCTAATCTAGCTGCCGGCTCAAATGACGATCGATATGGCGATGGGCATTTTAGAAGGATTGCATCAAATGTATCATCCTATATTGGTATGGTGTCGGACACACTCAGGATCACTATTCCGAAGGCTGTGGTTTATTGCCAGGTCAGAGAAGCAAAACAGTCATTGCTACACTATTTCTACACACAAATAGGGAAGAAAGAGGCTAAACAACTATCAGAGTTGTTAGACGAAGACCCTTCTGTGATGGAGAGAAGACAGCAATGCTTTAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAGATTGACTCAGTTTCTTGGGTACGATGA 1941 0.4312 MTTMESLIGLVNRIQQACTKLGDYGGSDSNTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEDGANEYAEFLHRPGRKITDFAVVRQEIQDETDRITGKTKQISPIPIHLSIYSPDVVNLTLIDLPGLTKVAIDGQSESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLSREVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGIVNRSQADINKNVDMIVARRKELEYFETSPDYGHLASKMGSVYLAKLLSQHLESVIRARIPSITSLINKSIDELESEMDHLGRPIAVDAGAQLYTILELCRKFERVFKEHLDGGRAGGDRIYNVFDNQLPAALRKLPIEKHLSLQNVKRVVSEADGYQPHLIAPEQGYRRLIEGTLSYFRGPAEASVDAVHFVLKELVRKSIGETEELRRFPTLQAEISAATSEALERFREVSKKTTIRLVDMESSYLTVDFFRRLPQEMERAGNPAHPTNPSNRKSPQKMEKAGTPAQPTNPSNLAAGSNDDRYGDGHFRRIASNVSSYIGMVSDTLRITIPKAVVYCQVREAKQSLLHYFYTQIGKKEAKQLSELLDEDPSVMERRQQCFKRLELYKAARDEIDSVSWVR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03315 646 Pfam Dynamin central region 226 493 IPR000375 -
Car07g03315 646 PANTHER DYNAMIN 1E-LIKE PROTEIN 519 645 - -
Car07g03315 646 PANTHER DYNAMIN 1E-LIKE PROTEIN 3 518 - -
Car07g03315 646 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 65 74 IPR019762 -
Car07g03315 646 PRINTS Dynamin signature 39 57 IPR022812 -
Car07g03315 646 PRINTS Dynamin signature 64 81 IPR022812 -
Car07g03315 646 PRINTS Dynamin signature 137 154 IPR022812 -
Car07g03315 646 PRINTS Dynamin signature 187 205 IPR022812 -
Car07g03315 646 PRINTS Dynamin signature 206 222 IPR022812 -
Car07g03315 646 PRINTS Dynamin signature 229 248 IPR022812 -
Car07g03315 646 ProSiteProfiles GED domain profile. 554 646 IPR020850 -
Car07g03315 646 Pfam Dynamin GTPase effector domain 552 642 IPR003130 GO:0003924|GO:0005525
Car07g03315 646 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 36 305 IPR030381 GO:0005525
Car07g03315 646 MobiDBLite consensus disorder prediction 511 543 - -
Car07g03315 646 Gene3D Dynamin, middle domain 331 612 - -
Car07g03315 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 313 IPR027417 -
Car07g03315 646 Gene3D - 4 314 IPR027417 -
Car07g03315 646 SMART dynamin_3 4 256 IPR001401 GO:0003924|GO:0005525
Car07g03315 646 CDD DLP_1 39 305 IPR001401 GO:0003924|GO:0005525
Car07g03315 646 SMART GED_2 549 642 IPR003130 GO:0003924|GO:0005525
Car07g03315 646 MobiDBLite consensus disorder prediction 506 546 - -
Car07g03315 646 Pfam Dynamin family 42 217 IPR045063 -
Car07g03315 646 PANTHER DYNAMIN 519 645 IPR022812 -
Car07g03315 646 PANTHER DYNAMIN 3 518 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03315 Car-Chr7 60976497 60982905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03315 - - cpap:110814826 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03315 07 60976497 60982905 Car07g03315 07 60976497 60982905 ECH