Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03308 ATGTCCACTCTACTTCAATCCTCTTTCATTTCTTCTTCCTTCTCTCGTTTCTCTCCAATCCAACCTTCCCCTCGAATCTCTCTCCCAAACGCTCTCAGATGTAACAATAATAATAATGTAGTAGAGTCTCTCAATTTGGATAACGGAAGGTTAGTTAACGGTTCAACTTCTCTTCCGAACTTCCTTGTGGCGCCTAACGCCGGCATCCATGATCTCGTTAACAGAAATCGTCTTCGAATTTTCTCCGGCACCGCCAACCCCGCTCTCGCTCAGGAAATTGCATGCTACATGGGCCTGGAACTGGGAAAAATTAAGATAAAACGTTTTGCCGATGGTGAGATATATGTCCAACTGCAAGAGAGTGTAAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAACCTTATGGAGCTTCTCGTAATGATTGATGCCTGCAGGAGAGCTTCAGCCAAAAATATTACTGCAGTTATTCCATATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCTATGGGCTACTTCGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTTGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTAGCTAGAGCACGTGCTTTTGCCAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCCGAGGTGATGAATTTGATTGGTGATGTAAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATCGATACAGCTGGAACCATCGCCAAGGGTGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGCCCTCCTGCTATAGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCGGTGTCAGAGAAGAACTATTTCCCTCAATTGACTGTCTTATCAGTGGCAAACCTTCTGGGCGAGACCATATGGCGCGTTCATGATGATTGCTCAGTGAGTAGCATATTTCAGTAA 1167 0.437 MSTLLQSSFISSSFSRFSPIQPSPRISLPNALRCNNNNNVVESLNLDNGRLVNGSTSLPNFLVAPNAGIHDLVNRNRLRIFSGTANPALAQEIACYMGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVSEKNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03308 388 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 202 217 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Car07g03308 388 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 39 387 - -
Car07g03308 388 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 39 387 IPR005946 GO:0000287|GO:0004749|GO:0009165
Car07g03308 388 SUPERFAMILY PRTase-like 143 379 IPR029057 -
Car07g03308 388 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 79 388 IPR005946 GO:0000287|GO:0004749|GO:0009165
Car07g03308 388 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 78 194 IPR029099 -
Car07g03308 388 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 78 388 IPR037515 GO:0004749
Car07g03308 388 CDD PRTases_typeI 237 349 IPR000836 -
Car07g03308 388 Gene3D - 221 364 IPR029057 -
Car07g03308 388 SMART Pribosyltran_N_2 78 194 - -
Car07g03308 388 Pfam Phosphoribosyl synthetase-associated domain 279 387 IPR005946 GO:0000287|GO:0004749|GO:0009165
Car07g03308 388 Gene3D - 81 379 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03308 Car-Chr7 60866609 60874963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03308 K00948 - gmx:100789585 640.188