Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03275 ATGAAGGGTGAAGAAGAGATGAACAAAACAACCTCAGAAGCTCCGAACAATGTTCCTGTTGTCGATTTTGTTGCTGAAGAGCGTGAAAATGGTGGTGATGGTAAGAAAGATGGTTCTTTTGCTGAAAAGGAGAATACCCAGTTGGAAAAAGGGGAAGATGAGGGAACCCAATTGGAAGATTCTGTTGCTgaagaagaacaagaacaagatgaatcagatggtcaacaacaacaagaagaagGAAATGAGGTTATACTTGTTGGAGTTAAAGGTGGTCCTTCTCTTGGTGATGGTTACTTTGAAGTTGAAGCTATTCGTCGTAAGAGAATCCGCAAGGGTAAAGTGGAGTACTTTGTAAAATGGTTGGGATGGGATGAGTCAGAAAACACTTGGGAGCCTCCAGGAAATTTAGTTGGTGTTCCTGATGTTGTTGATGCTTTTGAGGAGAGCTTCAAATCATCCAAGAGTAGGAAGCGCAAACGCAAGCATGTGGTTCAGCATGCTCAACTCAAGAGGAGGGTGGAACGTTCTGCCACTCCTTACAGCCTTAGATGCTTAAAAACTGGCAAACCTACCAATCATTTAAAGCCTGCCCCTGTCAGTGAACCTAGTAATCCTGTTATTCCCAATACTCCCGCGTTTCCTCGGACAGTGCTGTTTGCTGATGAAGTAGAAAATAATGACGATGGAAGCTATCTTGGAAAAGCAAATCATGCTAATGATAATTGGCTCGTGGTTGCTCCTCAAGAGTTTAATGAAAATAATGAGTATGATCCTAAGCTTAGTGAACTTAAAGTTACGGCATTGAATGGAAATGATGCAGACAACCTTGCAATACAGTTTCAAGAAGCTATGGTTTCTCCAGAAAAGGATAGTCAAATGAATGATCAACCAAATGTGGCTGGCACAGAACCGGTTGAAATTGGCCCCGGCAAGCCAGTAGGAAAACGGAGAAAATCTATTCTGACGAAGAGGTTCAGGACACATTCAGGACACATACCAAATGTTGATGCATCTGCGCCTGCACAAACAGAGGTTACTGATGATGCAGATCGGGCTACCTATAATGCGGCTCTTGTTTATAATGCAATACCGGATCCTGTTAAACCTGCCCGCGAAATTGTGAAGATTATAAGGCCAATAGGCTTTTCACCTGCAGTAGCCAACGCCTTGGAGCAGCGAGATGTTTTGGTGAGCTTCATAGCTATGAGGTCTGATGGATCAGAAGTTATAGTCGATAATCGATTTCTCAAGGCAAAATATCCGACTGTGTTGATTAATTTCTATGAGAAGCATCTGCGCTACAGTCCGAGATCATCGTGA 1323 0.4142 MKGEEEMNKTTSEAPNNVPVVDFVAEERENGGDGKKDGSFAEKENTQLEKGEDEGTQLEDSVAEEEQEQDESDGQQQQEEGNEVILVGVKGGPSLGDGYFEVEAIRRKRIRKGKVEYFVKWLGWDESENTWEPPGNLVGVPDVVDAFEESFKSSKSRKRKRKHVVQHAQLKRRVERSATPYSLRCLKTGKPTNHLKPAPVSEPSNPVIPNTPAFPRTVLFADEVENNDDGSYLGKANHANDNWLVVAPQEFNENNEYDPKLSELKVTALNGNDADNLAIQFQEAMVSPEKDSQMNDQPNVAGTEPVEIGPGKPVGKRRKSILTKRFRTHSGHIPNVDASAPAQTEVTDDADRATYNAALVYNAIPDPVKPAREIVKIIRPIGFSPAVANALEQRDVLVSFIAMRSDGSEVIVDNRFLKAKYPTVLINFYEKHLRYSPRSS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03275 440 SMART chromo_7 99 152 IPR000953 -
Car07g03275 440 ProSiteProfiles Chromo and chromo shadow domain profile. 100 159 IPR000953 -
Car07g03275 440 Coils Coil 48 68 - -
Car07g03275 440 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 34 438 IPR044251 GO:0006325|GO:0031507
Car07g03275 440 SMART ChS_2 363 438 IPR008251 GO:0005634
Car07g03275 440 MobiDBLite consensus disorder prediction 26 57 - -
Car07g03275 440 Pfam Chromo (CHRromatin Organisation MOdifier) domain 100 149 IPR023780 -
Car07g03275 440 CDD CD_CSD 100 149 - -
Car07g03275 440 ProSitePatterns Chromo domain signature. 117 137 IPR023779 -
Car07g03275 440 Gene3D - 94 164 - -
Car07g03275 440 MobiDBLite consensus disorder prediction 290 317 - -
Car07g03275 440 MobiDBLite consensus disorder prediction 1 81 - -
Car07g03275 440 MobiDBLite consensus disorder prediction 185 209 - -
Car07g03275 440 SUPERFAMILY Chromo domain-like 94 155 IPR016197 -
Car07g03275 440 PRINTS Chromodomain signature 97 105 IPR017984 -
Car07g03275 440 PRINTS Chromodomain signature 110 124 IPR017984 -
Car07g03275 440 PRINTS Chromodomain signature 125 137 IPR017984 -
Car07g03275 440 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03275 Car-Chr7 60333911 60337469 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03275 - - aprc:113849713 339.732