LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car07g03268	ATGTTGTGTTGTGTTAGTTTTGATTTGCTTAATTTAATAATGGCTTCTACAAGTGCTGCTGCTACGTTCCCTTTTTGTTCGCTTCAATTTCACTCTCTTTCTTCCAATCCTCAATTTTTCGTCGCCAAAATCCCTAATTACCAAATCTCCTTTTCTTCTTCGAGACGGACTTCTAATTATAATAAGCGCGTTTACGCAAAAGCTGTTTCTACAGACCCGCAAATAGCTCTCACCGAGGATAACCAAAACACTCCCTCGTCAACCTCCTCTAAGCTGGTTCTTGTTGTTGGTGCTTCTGGAGGTGTTGGGCAACTAGTTGTAGCATCATTGCTTCAGCGGAATATTAAATCGCGCTTGATACTTAGGGATCTTGAGAAAGCCAAGGCATTGTTTGGTGAACAAGATGAGGAGAGATTTCAGGTATTCAGAGGAGACACAAGGAAGCAGGGTGATTTGGATCCATCCATATTTGAGGGAGTCACTCATGTGATTTGCTGCACAGGAACAACCGCTTTTCCTTCAAGGCGGTGGGATGATGACAATACACCAGAAAGTGTTGATTGGGTGGGAGTGAAGAATCTAGTATCTGCATTGCCTTCCTCAGTGAAGAGAGTTGTTCTTGTGTCATCAATTGGTGTGACCAAGTGTAATGAATTGCCATGGAGCATTATGAACCTATTTGGTGTCTTGAAGTATAAGAAGATGGGGGAGGATTTTCTTCAGAGTTCTGGTTTTCCATTTACCATAATTAGACCTGGAAGGTTGACAGATGGACCATACACGTCTTACGATCTCAATACTTTACTCAAAGCAACAGCTGGTCAACGACGAGCAGTTCTAATTGGTCAAGGAGATAAACTAGTGGGAGAGGCCAGTAGAATTGTGGTTGCTGAAGCTTGCATACAGGCACTAGATCTTGAAGTCACTGAAAACCAAATATATGAAGTGAATTCTGTTGTGGGGGAAGGTCCTGGAAATGATGCTCAGAAGTGGCATGAATTATTCGAGACTGCACGCCCTCGCTAA	1026	0.4279	MLCCVSFDLLNLIMASTSAAATFPFCSLQFHSLSSNPQFFVAKIPNYQISFSSSRRTSNYNKRVYAKAVSTDPQIALTEDNQNTPSSTSSKLVLVVGASGGVGQLVVASLLQRNIKSRLILRDLEKAKALFGEQDEERFQVFRGDTRKQGDLDPSIFEGVTHVICCTGTTAFPSRRWDDDNTPESVDWVGVKNLVSALPSSVKRVVLVSSIGVTKCNELPWSIMNLFGVLKYKKMGEDFLQSSGFPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACIQALDLEVTENQIYEVNSVVGEGPGNDAQKWHELFETARPR	341

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car07g03268	341	CDD	SDR_a5	93	318	-	-
	Car07g03268	341	Pfam	NAD(P)H-binding	97	305	IPR016040	-
	Car07g03268	341	PANTHER	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	78	337	-	-
	Car07g03268	341	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	78	337	-	-
	Car07g03268	341	Gene3D	-	89	340	-	-
	Car07g03268	341	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	86	317	IPR036291	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car07g03268	Car-Chr7	60286890	60295100	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car07g03268	95	211	Miscellaneous Gene Families	AT4G27250	35.659	1.11e-08	54.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car07g03268	-		-	gmx:100804322	456.447