Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03263 ATGGAAGCCACAAAAAGACCTTGTATCTCAAAGTGGCACTATTCTTCTTCAACCAAAAGCAAAATTGTTAATAAATTCAATCCTATATGCCAAGCTGTCCAACAATTAACTCTCAAAGGAAAGTTTGTGATCATCCTCAATCAAAAGAAATCAATACCTGCAAAATTCATTTCTGTTCAGATTTTTAGTGGCACAGAAGTGGATCCTAATACCGGTAAAGGGTGGTTGAGCGAGAAAACATATTTTAAGGAATGTGGGAGCAAGAAAAATCACCATAATGATGGTGATGCACAAACCAAGATTAAGACATATAAAATTAAACTACAGGTGGACTCACATTTTGAAAATCCAAGAGCTTTTGTGATTCAAAACAAATACAATAAGAAATTTTTTCTTCAGTCTGCATCTATTGAGACTTGTACCAATAGAATCATTCACTTTGATTGCAATTCTTGGATATATCCAATCAAGAAGACCAAATCTGATAGACTCTTCTTCTCAAATAGATGTtatcttccaagtcaaacacctagagctttattggaactaagaaaggaagagcttgataaattgagaggtaataatggaatggaagaaagaagagaatgggatagaatctatgactatgactactacaatgacctcggcgatcctgacaaaggtttggagcattttagacctatcttaggcggttcaagattatatccatatccacgcagagtaagaacaggtcaaaaacgtagtacagaagGTCCATCAACTGAGAGAAGGCCACAAGCAACAAATTTTGACATATATATCCCTTCAGACGAGAGATTTAGCCCCAACAAATTGAAGGAGCTCAAATCAAATTCTATCCATGCCATGATACATTTACTATCTTTAAAGACAGAATCATTACATCAAAAAAGTTCTAAAAGCTTTCAATCATTTGAAGAGATACTTGGCATGCTCTCAAGCAATAGAAACCGAACAATAGACGGATGGATCAGAGACACCTTAAAGAAAATACCAATTAAGCACTTTAAGGAAATAACTCAGGCGATCAACGAAGACCTACGGAATATTCCTATCCGTCCAATCATATATGAAAATGAATGGACTTGGAATGATGACATGGAGTTTGGGCGACAAATGCTTGCAGGAACACACCCTGTCAGAATCCAGTGTTTGAAGACATTTCCACCTCAAAACAAATATGGAGTGCAGAGTTCAGTTGAACAATCAATCATAGAACAGATGCTTGAAGGATGGACACTTCCTCAGGCCTTGGAACAAGGAagaatattcatgttggagcaccatgactatctcatgccatatttgaacagaataaatgcaaatgggtttgccaggctcatctatagctcttga 1374 0.2751 MEATKRPCISKWHYSSSTKSKIVNKFNPICQAVQQLTLKGKFVIILNQKKSIPAKFISVQIFSGTEVDPNTGKGWLSEKTYFKECGSKKNHHNDGDAQTKIKTYKIKLQVDSHFENPRAFVIQNKYNKKFFLQSASIETCTNRIIHFDCNSWIYPIKKTKSDRLFFSNRCYLPSQTPRALLELRKEELDKLRGNNGMEERREWDRIYDYDYYNDLGDPDKGLEHFRPILGGSRLYPYPRRVRTGQKRSTEGPSTERRPQATNFDIYIPSDERFSPNKLKELKSNSIHAMIHLLSLKTESLHQKSSKSFQSFEEILGMLSSNRNRTIDGWIRDTLKKIPIKHFKEITQAINEDLRNIPIRPIIYENEWTWNDDMEFGRQMLAGTHPVRIQCLKTFPPQNKYGVQSSVEQSIIEQMLEGWTLPQALEQGRIFMLEHHDYLMPYLNRINANGFARLIYSS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03263 457 Gene3D - 172 275 - -
Car07g03263 457 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 170 457 IPR013819 GO:0016702|GO:0046872
Car07g03263 457 Pfam Lipoxygenase 180 449 IPR013819 GO:0016702|GO:0046872
Car07g03263 457 Gene3D - 367 457 - -
Car07g03263 457 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 37 449 - -
Car07g03263 457 Gene3D - 277 366 IPR027433 -
Car07g03263 457 ProSiteProfiles PLAT domain profile. 55 167 IPR001024 GO:0005515
Car07g03263 457 PRINTS Plant lipoxygenase signature 137 155 IPR001246 GO:0016491
Car07g03263 457 PRINTS Plant lipoxygenase signature 163 184 IPR001246 GO:0016491
Car07g03263 457 PRINTS Plant lipoxygenase signature 203 219 IPR001246 GO:0016491
Car07g03263 457 PRINTS Plant lipoxygenase signature 305 326 IPR001246 GO:0016491
Car07g03263 457 PRINTS Plant lipoxygenase signature 236 255 IPR001246 GO:0016491
Car07g03263 457 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 52 171 IPR036392 GO:0005515
Car07g03263 457 PANTHER LIPOXYGENASE 37 449 IPR000907 GO:0016702|GO:0046872
Car07g03263 457 Gene3D PLAT/LH2 domain 15 171 - -
Car07g03263 457 MobiDBLite consensus disorder prediction 240 261 - -
Car07g03263 457 SMART LH2_4 38 168 IPR001024 GO:0005515
Car07g03263 457 SUPERFAMILY Lipoxigenase 172 449 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03263 Car-Chr7 60220943 60224585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03263 57 448 Acyl Lipid Metabolism Gene Families AT1G55020 39.401 1.53e-90 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03263 K00454 - gmx:100793997 657.136