Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03231 ATGATCCCAAATCAACTCATAACCGACATATCCTTAAACCAAACACTCTCAAACCAATGGGTCCAATCCAACCTCGTACCCTTTTACCCAAAAACACTCATTCGTTATCTTCTTGTCGGTAACGAACTCATTTCATCCACAACAAACCAAACATGGCCCCACATTGTACCCGCGATGCACCGAATCAAAAACTCCCTAACTAACTTTGGTTTGCATAAAGTCAAAGTTGGAACTCCTTTAGCAATGGACATTTTACAAACATCGTTTCCACCTTCAAACGGCATTTTTAGAAACGATATTGCGTTTACCGTTATCAAACCCATGTTGGAGTTTTTAAACATAACTAACTCTTTTTTCTTCTTAGATGTATACCCGTTTTTTTCTTGGGCTTCGGATCCTATTAATATTAACTTGAATTATGCTATTTTTGAATCCGATAATATCACGGTTACGGATCCGAATACGGGTTTGGTTTATACTAATTTATTTGACCAAATGGTGGATGCGGTTTATTTTGCAATGGAGCGGCTTGGGTTTTCGGATATTCGGATATTTATTGCTGAAACGGGTTGGCCCAATGGTGGTGATTTGGACCAAATTGGCGCGAATATTTACAATGCTGCCACGTATAATAGAAACTTTGTGAAAAAAGTTACGAAAAAACCTTCGGTTGGGACACCGGCTCGACCGGGTTCAATTATTCCGTCTTTTATTTTTTCTTTGTATAATGAGAACTTAAAACCGGGATTGGGAACAGAACGTCACTTTGGGTTATTGTATCCGAATGGGTCAAGTGTTTATGAAATTGATCTTTCTGGAAAGACACTGGCGTCGGAGTTTAAGCCGTTGCCGCCACCAGAAAATTATAAAGGGAAGGCGTGGTGTGTGGTAGCGGAGGGAGCCAATGAGACAGCAGTGGCGGAGGCGTTGTCATATGCTTGCTCGCAGGGAAACCGTACATGTGACCCGGTTCAACCCGGAAAACCGTGTTTTGAACCGGTTTCGGTGATAGGTCATGCTAGTTATGCGTTTAGTTCTTATTGGGCTCAGTTTAGGAATGTGGGTGGAACTTGTCAGTTCAATGGTCTTGCCATTCAAATCGCAAAGGATCCAAGCTATGGATCTTGCAAGTACCCAAGTGTGACTCTTTAA 1152 0.4167 MIPNQLITDISLNQTLSNQWVQSNLVPFYPKTLIRYLLVGNELISSTTNQTWPHIVPAMHRIKNSLTNFGLHKVKVGTPLAMDILQTSFPPSNGIFRNDIAFTVIKPMLEFLNITNSFFFLDVYPFFSWASDPININLNYAIFESDNITVTDPNTGLVYTNLFDQMVDAVYFAMERLGFSDIRIFIAETGWPNGGDLDQIGANIYNAATYNRNFVKKVTKKPSVGTPARPGSIIPSFIFSLYNENLKPGLGTERHFGLLYPNGSSVYEIDLSGKTLASEFKPLPPPENYKGKAWCVVAEGANETAVAEALSYACSQGNRTCDPVQPGKPCFEPVSVIGHASYAFSSYWAQFRNVGGTCQFNGLAIQIAKDPSYGSCKYPSVTL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03231 383 Gene3D Glycosidases 1 278 - -
Car07g03231 383 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 375 IPR044965 GO:0004553|GO:0005975
Car07g03231 383 PANTHER BNAC03G35190D PROTEIN 1 375 - -
Car07g03231 383 ProSitePatterns Glycosyl hydrolases family 17 signature. 182 195 IPR000490 GO:0004553|GO:0005975
Car07g03231 383 Gene3D - 288 381 - -
Car07g03231 383 Pfam X8 domain 294 364 IPR012946 -
Car07g03231 383 Pfam Glycosyl hydrolases family 17 2 270 IPR000490 GO:0004553|GO:0005975
Car07g03231 383 SUPERFAMILY (Trans)glycosidases 3 270 IPR017853 -
Car07g03231 383 SMART X8_cls 293 378 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03231 Car-Chr7 59920999 59924456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03231 1 383 Glycoside Hydrolase AT3G23770 55.784 3.83e-163 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03231 - - ccaj:109805358 624.009