Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03200 ATGGGAATAGCGTCACTGTCTCTAGTCGGCAGCAACGCCAAGTCACTGGGAAAAGGCAGAGGCAAGATGACAAGTGGGAACATGATCTATTCAATGATGATGAACCCTGGATCACTAGTATGGACTGATTCTGTTATTCTCATATGCAAGTATAAGTTACCACTGTTGTTGGATGTCAATAGTTCTTTTTTTATGGGTTTTGACTGTTTGTTAATGGCTTGTGAAGATCGCAAAGTTACTCGTCAAGATCTCCGTGTTAAGCTTCAAAAGAAAGGTCTTCAACCTGATACCCAAAGTGGAAAGAGTTCTGCTCCAAACATCCGGGATCTTCGTGAAAGACTATCAGGGACAATGAATTCACAGCCTAAAAATACCGATCCACCAAAGTCAAAAGTGATTGCTAAACCGAGCAGTAAAAGTGCTGGTGTTGAGGCTCCTGCAGTCAAAAGACCTGCTAACCCAGCTCCTAAAAGGGCACGGAAGGATGATACATCAGTGGATGAATTTTTGCTGTCCTTGGGTCTCGAAAAGTATCTCATAACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAAACATATGACTGATGAGGACCTCAAGGCTATGAGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCTTTGGATTCAAAAGTCTAA 666 0.4204 MGIASLSLVGSNAKSLGKGRGKMTSGNMIYSMMMNPGSLVWTDSVILICKYKLPLLLDVNSSFFMGFDCLLMACEDRKVTRQDLRVKLQKKGLQPDTQSGKSSAPNIRDLRERLSGTMNSQPKNTDPPKSKVIAKPSSKSAGVEAPAVKRPANPAPKRARKDDTSVDEFLLSLGLEKYLITFQAEEVDMTALKHMTDEDLKAMSIPMGPRKKILLALDSKV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03200 221 ProSiteProfiles SAM domain profile. 161 215 IPR001660 GO:0005515
Car07g03200 221 PANTHER OSJNBA0060P14.15 PROTEIN 149 208 - -
Car07g03200 221 CDD SAM_superfamily 165 218 - -
Car07g03200 221 PANTHER OSJNBA0060P14.15 PROTEIN 76 133 - -
Car07g03200 221 Gene3D - 163 221 IPR013761 -
Car07g03200 221 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 76 133 - -
Car07g03200 221 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 149 208 - -
Car07g03200 221 MobiDBLite consensus disorder prediction 115 164 - -
Car07g03200 221 Pfam SAM domain (Sterile alpha motif) 162 218 IPR001660 GO:0005515
Car07g03200 221 SUPERFAMILY SAM/Pointed domain 164 218 IPR013761 -
Car07g03200 221 SMART SAM_4 158 221 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03200 Car-Chr7 59626682 59632377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03200 76 220 Glycosyltransferase AT3G07170 58.904 1.94e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03200 - - gmx:100784706 219.55