Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03188 ATGGCTTCTTCTCTCCACCAAAACCCCACTTTCCTTAAACCCCAACCCTCTCTAACACCAAAACATGCCACCACGCGCCGTAACTATATTCCAGTACGATGTGGAAGACCGCGTTCCCAACGTGGACCTCTAATAAAAGGCCGATTCCTAAGCATCGaagcaatccaagccatacaaactctaaaacgcatcaaccgaatcaatccaccgaaccaaacccaacTCCTTTCCAATACTCTCACTCGTTTAATCAAATCCGACCTAGTCGCCACTCTACATGAGCTTCTACGCCAACAACACTGTACCCTCGCACTTCGTGTCTTCTCCGCCGTCAGATCTGAGTACGGAGCAGATCTATCGCTTTATGCGGAAATGGTGCAGGCGCTTGATAAATGTAATATGTCGGAAGATGTAGACCGTTTGATTGAAGAGATTGAAATGGAGGGTGGGATTCGGTGTGATGAAGTTCAGAGGAAAGGGATTTTGAATTTGATTAAGGCTGTTGTTTGTGCGCAGAGGAGAGAATCGACGGTTAGGATTTATGAGATGATGAAGAGGAGTGGATGGGGATCGAGTGTTGAACCTGATGAGGCGGTGCATGGACACAACACACACTCCTTCATCATCATCGTTCATCTTCCCAAAATGAGCAGCACTACTCTCCCTTCGATTCCACCACAAGATGCATGGACTCTCACTTCCCATAACTTACTCCCTCGCTGGGCTTCACTTCCCCTCTCTCACCAATCAACGATCCCAATTTCAATATCGAGAGTGAACCAAGTTGATGCTGCAAGACTAGACGTTGAAATGTCAGCCATGTTGAAAGAACAGTTGGTTAAAGTCTTCACTTTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCGGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGAGGTTCTCAATTTGGGTCGATAAACCAACTCCCGGCATTGCTCTCATGAATCTGAGGTATAGAGATGAGCGTGCAGTTGAATCAAGAGATAAAGTTAGAACTGGTCTCGAGGGACCTGGACTCACTGTTGCTCAGAAGATTTGGTATTGTGTTGCCACTGTTGGTGGGCAGTATATTTGGGCACGGTTACAATCATTCTCTGCATTTCGTAGGTGGGGTGATACTGAGCAGAGACCATTGGCACGGCGCTTATGGATCTTGATACAAAGAATAGAAGGGATTTATAGAGCTGCTTCATTCGGAAACCTGTTGATATTTCTTTGCACGGGAAGCAGATATCGAAATCTTATTGAAAGAGTCTTACGGGCTAGGCTTGTATATGGGAGCCCAAATATGAACCGCGCTGTTAGCTTTGAGTATATGAACCGACAATTAGTTTGGAATGAATTCTCGGAAATGCTGTTGTTGCTTCTTCCTCTTCTTAATTCTTCATCGGTGAAAAATCTCCTCCGGCCTTTTTCTAAGGATAAATCCTCAAGTTCGGCTGAGGATACCACTGCTTGTCCCATTTGCCAGGCTACTCCAATCATTCCTTTTGTTGCTTTACCATGTCAGCACAGATATTGTTACTACTGTCTTCGGACACGATGTGCGGCTGCCCCATCATTTAGGTGTTCAAGGTGCAATGAGCCAGTTGTTGCTATGCAACGCGATGTTGGTGTCTCCATGGAATAA 1656 0.4348 MASSLHQNPTFLKPQPSLTPKHATTRRNYIPVRCGRPRSQRGPLIKGRFLSIEAIQAIQTLKRINRINPPNQTQLLSNTLTRLIKSDLVATLHELLRQQHCTLALRVFSAVRSEYGADLSLYAEMVQALDKCNMSEDVDRLIEEIEMEGGIRCDEVQRKGILNLIKAVVCAQRRESTVRIYEMMKRSGWGSSVEPDEAVHGHNTHSFIIIVHLPKMSSTTLPSIPPQDAWTLTSHNLLPRWASLPLSHQSTIPISISRVNQVDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVESRDKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGSRYRNLIERVLRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSSSAEDTTACPICQATPIIPFVALPCQHRYCYYCLRTRCAAAPSFRCSRCNEPVVAMQRDVGVSME 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03188 551 MobiDBLite consensus disorder prediction 1 24 - -
Car07g03188 551 ProSitePatterns Zinc finger RING-type signature. 511 520 IPR017907 -
Car07g03188 551 Gene3D Tetratricopeptide repeat domain 49 202 IPR011990 GO:0005515
Car07g03188 551 SUPERFAMILY RING/U-box 490 542 - -
Car07g03188 551 PANTHER - 216 548 - -
Car07g03188 551 Pfam Pex2 / Pex12 amino terminal region 268 473 IPR006845 -
Car07g03188 551 ProSiteProfiles Zinc finger RING-type profile. 495 536 IPR001841 -
Car07g03188 551 MobiDBLite consensus disorder prediction 1 27 - -
Car07g03188 551 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 469 548 IPR013083 -
Car07g03188 551 CDD RING-HC_PEX2 494 536 - -
Car07g03188 551 Pfam Zinc finger, C3HC4 type (RING finger) 495 535 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03188 Car-Chr7 59478997 59485063 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03188 K06664 - gmx:100805856 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03188 07 59478997 59485063 Car07g03188 07 59478997 59485063 ECH