Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03160 ATGGCCTCTTATAGGCCTTTCCCTCCTCCATCGTCGACTCAAAACCCTATCGCACCACCGCCACAACCACCGCCGCAACAAAGAGGGAATAATTGGGGTGGTTACGGTTACGGTGGTGGTGTTCCTGTTGGTGATTCTTCTACTACTTCGTTTCCGCAAATACCTCCAAATTCAAATTTTCAACAACATCATCAACATCATGTTcctcctcctcctccaccaccttcgaattactatccataccctccaccaccacctcctcctccgccggaaaattcatatcagcctccaccaccaccaccacctccacctGCTGCTACTATGTATTATCCTCCTAATAATCAATACAACCATCAACAACCGCCTCCGCCACCTCCTCCTTTGTCGCCGGGTTCTTCCATGCCGCCTCCACCACCTCCTCCAACCTCGCCGCCACCTCCTCCTCCTCATGAAGAGAGGGCAATCAATAAAGGGTCTTCTGGTAGGCGAGACAGTGTCTCCCATAAACAGCAGCACAAGGATCCTCATCCTCCAAGGAGGGTTGAGACGGACGAAGAGAGGAGGTCGAGGAAGAAGAAGGAGTTTGAGAAGTTAAGGCAAGAAGAAAAGCATAGGCAGCAGCAGAAGCAGCTGAAGGAATCACAGAATACTGTTCTGCAAAAGACTCAGATGGTGTCATCTGGAGGGACTGGAAAGGTCCATGGTTCCATTGCCGGGTCTCGAATGGGAGAAAGAAGAAATGCTCCCTTATTGAGCAGTGAAAGGGTTGAAAATAGGTTGAAAAAGCCCACCACTTTTTTGTGTAAGCTCAGATTTCGAAATGAACTTCCGGATCCAACTGCACAACCTAAGCTTATGGCGTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCTCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCAGATCTAGGGATACCTCTGGACTTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCCGACCACCTCTTGCTCCAGAAGATGAAGATTTACTGCGAGATGATGAAGCTGTTACTCCTATGAAAAAAGATGGTATTAAAAGAAAAGAGAGGCCGACTGATAAAGGTGTAGCTTGGCTTGTTAAAACACAATATATATCTCCTTTAAGCATGGAATCGACCAAACAGTCCTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGAGGAAGGGAGGCCGCAATCTCTTGGAAAATCTTAACAATAGGTATGGAAAGNNNNNNNNNNNNNNNNNNNNNTTTGAAGCAGCTAAGTCACAAGCTGTTCATGCAACTAAAAAAGATTTGTATCCTGTTGAGTTTATGCCATTCTTGCCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCAACAATAGATTCAGAAATGTTCAGTAAGTTGGGCAAATCTGTTCGTGATATCTCTGAATCCAGGGCAGTTATGAAAAGTTATGTTGCAACAAGCTCAGATCCTGCTAATCCTGAGAAATTTTTGGCATACATGGCCCCAGCACCGGGAGAGTTGTCAAAGGATATATATGATGAAAATGAAGAAGTCACTTATTCTTGGGTTCGCGAGTATCATTGGGATGTTCGAGGTGACGATGCACACGACCCCACAACATTTGTAGTTTCGTTTGATGAGTCAGAAGCTCGATATTTGCCTCTTCCAACTAAACTTGTTCTAAGAAAAAAGAGGGCGAAAGAGGGAAGATCTGGTGATGAGGTTGAGCAATTTCCAATTCCGGCTAGAGTGACTGTGAGGAGAAGGTCAAGTGTTGCTGCAATTGAGCGGAAGGATTCTGAGGTTTATACAAGTTTAAAGGGCAATTCGTCAAAGAGCCTAGAAATGGATGACGATCTTGACCACGAACATAGAGTTGCAGGGCTCCATGATAATTTTCAATCTAGTGGAGAAGATGATATGTCCGAATAA 1974 0.4103 MASYRPFPPPSSTQNPIAPPPQPPPQQRGNNWGGYGYGGGVPVGDSSTTSFPQIPPNSNFQQHHQHHVPPPPPPPSNYYPYPPPPPPPPPENSYQPPPPPPPPPAATMYYPPNNQYNHQQPPPPPPPLSPGSSMPPPPPPPTSPPPPPPHEERAINKGSSGRRDSVSHKQQHKDPHPPRRVETDEERRSRKKKEFEKLRQEEKHRQQQKQLKESQNTVLQKTQMVSSGGTGKVHGSIAGSRMGERRNAPLLSSERVENRLKKPTTFLCKLRFRNELPDPTAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEDLLRDDEAVTPMKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELRERKGGRNLLENLNNRYGKXXXXXXXFEAAKSQAVHATKKDLYPVEFMPFLPDFDRYDDQFVVAAFDNAPTIDSEMFSKLGKSVRDISESRAVMKSYVATSSDPANPEKFLAYMAPAPGELSKDIYDENEEVTYSWVREYHWDVRGDDAHDPTTFVVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQFPIPARVTVRRRSSVAAIERKDSEVYTSLKGNSSKSLEMDDDLDHEHRVAGLHDNFQSSGEDDMSE 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03160 657 Coils Coil 427 430 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 155 210 - -
Car07g03160 657 Pfam Paf1 266 590 IPR007133 GO:0006368|GO:0016570|GO:0016593
Car07g03160 657 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 242 639 IPR007133 GO:0006368|GO:0016570|GO:0016593
Car07g03160 657 MobiDBLite consensus disorder prediction 116 152 - -
Car07g03160 657 Coils Coil 181 217 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 626 643 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 211 230 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 9 27 - -
Car07g03160 657 SUPERFAMILY Formin homology 2 domain (FH2 domain) 136 148 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 66 109 - -
Car07g03160 657 PANTHER RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED 242 639 - -
Car07g03160 657 Coils Coil 410 419 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 1 256 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 620 657 - -
Car07g03160 657 MobiDBLite consensus disorder prediction 43 65 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03160 K15174 - gmx:100800148 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03160 07 58839376 58844550 Car07g03160 07 58839376 58844550 ECH