Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03156 ATGGGGAGTTCTGAAGGGTTAGGAGCATCGTCGAAGCCTTCTACTCAGGCACCACCAAAACAATACGGTGTTACGAAGCCAATTTCAATGGCTGGTCCAACAGTGCTTGATTTAAAAAAGACTCAACAGTTGGAGAAGTTTCTCGCTGATTCAGGTTTATATGAGAGCAAGGAGGAGGCTTCCAAGAGAGAAGAGGTCCTTCAACGACTTGAACAGATAGTAAAAAGTTGGGTGAAGCAGCTTACTCGCCTGAAGGGATACACTGATCAAATGGTGGAAGATGCAAATGCTGCCATAGTCACTTTTGGTTCTTATCGTCTTGGCGTTCATGGTCCTGGAGCTGACCTAGATACACTGTGTATTGGGCCTTCCTATGTAAACCGCGAGGAGGATTTTTTCTACACATTGCATGATATCCTTGCTAACGTGGATGAAGTTACTGAACTACAACCCGTTCCAGATGCTCATGTCCCAGTTATGAAGTTCAAGTTTCACGGAATATCTATCGACCTTCTTTATGCAAGTATTTCTTGCCTGATTGTTCCTCATGAATTGGATATATCTGATGTCTCTGTTCTACACAATGTTGACGAGCCTACTGTTCGAAGTTTGAATGGCTGTAGGGTTGCTGATCAAATTCTAAAGCTTGTTCCAAATGTTGAGTACTTTCGAACCACACTCCGGTGCTTGAAGTTTTGGGCCAAAAGACGAGGCGTTTATTCCAATGTGACAGGTTTTCTCGGTGGGGTTAACTGGGCACTTCTTGTTGCTCGAGTATGCCAGTTGTATCCAAATGCAGTTCCAAGCATGCTTGTCTCTCGATTCTTTAGGGTATATACACAGTGGCGGTGGCCAAATCCTGTCATGTTATGTCCAATCGAGGAGAATGAGCTTGGGTTTTCTGTGTGGGATCCTCGTAGAAATCCTCGTGATCGAACTCATCTTATGCCAATCATAACTCCTGCCTATCCTTGCATGAATTCAAGTTATAATGTTTCTACAAGCACACTTCGAGTTATGATGGAGCAGTTTGAATATGGCAACAGAATCTCTGGGGATATAGAACTGAATAAAGTTTGCTGGAGTGCTCTGTTTGAACCGTACATTTTCTTTGAAGGCTACAAAAACTTTTTGCAAATTGACATAGTTGCTGCTGATGTTGACGACTTGCGTGCTTGGAAAGGTTGGGTGGAATCACGCCTTCGGCAGCTGACTTTGATGATTGAGCGTGACACTTTTGGGAAGTTGCAGTGCCATCCCTATCCTCAGGAGTATATTGATGCTTCAAGGCAATGTGCACACAGTGCTTTCTTCATGGGCTTGCAGAGGAAACAGGGGGAGGCTGTTCAAGAAGGCCAGCAGTTTGATATACGTGGGACTGTCGAAGAATTTCGGCATTCTGTTAATATGTACATGTTCTGGAAACCTGGGATGGATATTCATGTTTCTCATGTTCGTAGAAGGCAAATCCCATGCTATGCATTTCCTGATGGTTATAAACGAACCCGACCATCAAAGTCAGCACAACTGGAGAATCCTTCAAAATCATTTCATGAAAATGAGATTTCTGGGTCTGAACTTGGTGAGAGAAACTCTAAGAGGAAGCACGATGACAGGGTTAAGCAGGATGTTAAACTGAAAAGGCATTCTCCCTCTCGTCCTTTGGAGAGTTCGACAAAAGGCAACTTGTGTCTCGGTGCTTGTGACATGCCTGTTGATTCTGTATCTGATTGTCAAGTGTCGAAAAATGTTGAGAGTGTGAATTTATCTAACAGTGTGCAAGATGAGTTGGATAGAAGAATGTCTCCGGAAGCTCAGACTGGCAGTGCATCAAATTCTAGCGTGGTTACATCGATTTCAAGTGACGGTGGCTCTCCTGAAGATATTCGATCTGTATCAGTGGCAGGTTATGCTGAGGACAACACAAGGGCTGTTGAGGCAACAACCAATTGTAGATTTGAGGATACCACTTACAGGGCAGATTCTGTAAAACTTGGAAACCACAATATATTGACCTGTGGAAATAATGAAGTATTACAAGACGGGCTACAGACACAGTTGGAGCCAAATGCAATGTCGGGGATGTTTCTTGATTCTAAGGAAAGCTTTCATACAGAAGCTATGCAAAAGTCAGCAATAAGGAGACTGAGTTTAACATCAACCGCGAGAAAGCCAGTAATTTGTTGTCAATATGAGTCACCTCAATCGGTTATCAGTTCTCTCCAGCAACGTTTATTTGCAATGATGACAAAATGGTCGAAGATCGAAATTATCTTCGTGTTGGTTTGGCCTAAAGATGAAGTGTTGGATTGGCCTAATGGTGAAGAGAAAATGGTGGTGGTGTGTGCGACGGTGATCGGCGCAACGGCGGCATGTGCGGTGGCGACAGTGTTAATACAGCGTCACATGAAGAAATCAAGGAGATGGGGAAAAGCAATGTCGATATTGAAAGAGTTTGAAGAGAAATGTGCGACTCCGACGTGGAAGCTGAAACAGGTTGCAGATGCAATGACGGTTGAGATGCACGCCGGTCTTGCTTCCGAAGGTGGTAGTAAGCTCAAAATGCTCATCAGTTTCGTTCATAATCTTCCAACAGGGAATGAGGAAGGACTATTTTATGCATTGGATCTTGGAGGGACTAACTTCCGTGTATTACGTATGCAACTCGGTGGCAAGGATGGTGGTATTATTAGTCGAGAATTTACCGAGGTTTCGATTCCTCCTAATTTGATGGTTGGGACATCAACTGCACTCTTTGACTATATTGCAGCAGAACTTGCAAAGTTTGTTAATGAAGAAAGTCAAGATTTCCAAGTTCCTCCAGGTAGAAAGAGGGAGCTAGGTTTTACTTTTTCCTTTCCTGTCATGCAAACGTCAATTGCTTCCGGCAACCTTATCAAGTGGACAAAAGGCTTCAACATCGATGATGCAGTTGGTCAGGATGTTGTTGCTGAATTGAGTAAAGCAATTGAGAGACAAGGTCTTGATATGCACATAACAGCTTTGGTCAATGATACAGTTGGGACATTAGCTGGTGGCCGATATACAAACAAAGATGTCATGGCTGCCGTTATTTTAGGTACCGGAACAAATGCAGCGTATGTGGAGAATGCTCAAGCAATACCAAAATGGCACGGTCCTTTGCCCAAGTCCGGAGAAATGGTTATCAACATGGAATGGGGAAACTTCCTGTCATCGCACCTTCCATTAACGGAGTATGATAATGCGTTAGATGCTGAGAGTTTAAACCCTGGTGAACAGATTTTTGAGAAGATAATTTCCGGAATGTACTTGGGAGAAATTGTTCGTAGAGTATTATGCAAAATGGCTGAAGAAGCTTTCTTTTTTGGCGAGACTGTTCCTCAAAAACTGAAAGTTCCATTCATATTAAGAACACCTGACATGTCTGCCATGCATCATGATACATCTGCTGATCTCAATGTTGTTGAAAGCAAACTGAAGAACATTTTCGAGATATCTAATACCTCCCTGGTAGTAAGAAAGGCGATTGTTGAGCTTTGCAATATCGTTGCAACCCGCGGTGCTCGTCTTTCTGCTGCTGGCATCTTGGGAATCCTGAAGAAGTTGGGAAAAGATACGGTCAGTGACGGCGAGGGTAACAAGAATGTGATAGCCATGGATGGTGGATTGTATGAGCATTACACTGAGTATAGAAAGTGCTTAGAGAATACACTAAAAGAGTTGGTTGGTGAAGATTTATCAGATAGTATTGTTGTTGAACACTCTAATGATGGTTCAGGCACTGGTGCTGCACTTCTTGCTGCTTCTCAATCCCATTACCTTGATGGTTAA 3813 0.4322 MGSSEGLGASSKPSTQAPPKQYGVTKPISMAGPTVLDLKKTQQLEKFLADSGLYESKEEASKREEVLQRLEQIVKSWVKQLTRLKGYTDQMVEDANAAIVTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILANVDEVTELQPVPDAHVPVMKFKFHGISIDLLYASISCLIVPHELDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRRNPRDRTHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFEYGNRISGDIELNKVCWSALFEPYIFFEGYKNFLQIDIVAADVDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPQEYIDASRQCAHSAFFMGLQRKQGEAVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMDIHVSHVRRRQIPCYAFPDGYKRTRPSKSAQLENPSKSFHENEISGSELGERNSKRKHDDRVKQDVKLKRHSPSRPLESSTKGNLCLGACDMPVDSVSDCQVSKNVESVNLSNSVQDELDRRMSPEAQTGSASNSSVVTSISSDGGSPEDIRSVSVAGYAEDNTRAVEATTNCRFEDTTYRADSVKLGNHNILTCGNNEVLQDGLQTQLEPNAMSGMFLDSKESFHTEAMQKSAIRRLSLTSTARKPVICCQYESPQSVISSLQQRLFAMMTKWSKIEIIFVLVWPKDEVLDWPNGEEKMVVVCATVIGATAACAVATVLIQRHMKKSRRWGKAMSILKEFEEKCATPTWKLKQVADAMTVEMHAGLASEGGSKLKMLISFVHNLPTGNEEGLFYALDLGGTNFRVLRMQLGGKDGGIISREFTEVSIPPNLMVGTSTALFDYIAAELAKFVNEESQDFQVPPGRKRELGFTFSFPVMQTSIASGNLIKWTKGFNIDDAVGQDVVAELSKAIERQGLDMHITALVNDTVGTLAGGRYTNKDVMAAVILGTGTNAAYVENAQAIPKWHGPLPKSGEMVINMEWGNFLSSHLPLTEYDNALDAESLNPGEQIFEKIISGMYLGEIVRRVLCKMAEEAFFFGETVPQKLKVPFILRTPDMSAMHHDTSADLNVVESKLKNIFEISNTSLVVRKAIVELCNIVATRGARLSAAGILGILKKLGKDTVSDGEGNKNVIAMDGGLYEHYTEYRKCLENTLKELVGEDLSDSIVVEHSNDGSGTGAALLAASQSHYLDG 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03156 1270 CDD NT_PAP_TUTase 62 217 - -
Car07g03156 1270 SUPERFAMILY Actin-like ATPase domain 801 1017 IPR043129 -
Car07g03156 1270 Pfam Poly(A) polymerase central domain 23 367 IPR007012 GO:0004652|GO:0043631
Car07g03156 1270 MobiDBLite consensus disorder prediction 1 28 - -
Car07g03156 1270 MobiDBLite consensus disorder prediction 505 521 - -
Car07g03156 1270 PANTHER NUCLEAR POLY(A) POLYMERASE 4 14 600 - -
Car07g03156 1270 MobiDBLite consensus disorder prediction 604 627 - -
Car07g03156 1270 SUPERFAMILY Actin-like ATPase domain 1019 1264 IPR043129 -
Car07g03156 1270 ProSiteProfiles Hexokinase domain profile. 810 1262 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Car07g03156 1270 SUPERFAMILY PAP/OAS1 substrate-binding domain 218 367 - -
Car07g03156 1270 MobiDBLite consensus disorder prediction 1 22 - -
Car07g03156 1270 Gene3D - 23 365 - -
Car07g03156 1270 SUPERFAMILY Nucleotidyltransferase 19 216 IPR043519 -
Car07g03156 1270 PRINTS Hexokinase family signature 999 1015 - -
Car07g03156 1270 PRINTS Hexokinase family signature 1247 1263 - -
Car07g03156 1270 PRINTS Hexokinase family signature 873 889 - -
Car07g03156 1270 PRINTS Hexokinase family signature 1170 1192 - -
Car07g03156 1270 PRINTS Hexokinase family signature 1087 1109 - -
Car07g03156 1270 PRINTS Hexokinase family signature 1022 1036 - -
Car07g03156 1270 PRINTS Hexokinase family signature 947 972 - -
Car07g03156 1270 Gene3D - 858 1261 - -
Car07g03156 1270 Gene3D Beta Polymerase, domain 2 55 211 IPR043519 -
Car07g03156 1270 Pfam Hexokinase 1022 1262 IPR022673 GO:0005524|GO:0005975|GO:0016773
Car07g03156 1270 Gene3D Poly(A) polymerase predicted RNA binding domain 370 485 - -
Car07g03156 1270 Pfam Hexokinase 816 1015 IPR022672 GO:0005524|GO:0005975|GO:0016773
Car07g03156 1270 MobiDBLite consensus disorder prediction 503 560 - -
Car07g03156 1270 Pfam Nucleotidyltransferase domain 93 170 IPR002934 GO:0016779
Car07g03156 1270 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 370 495 IPR011068 GO:0003723|GO:0016779|GO:0031123
Car07g03156 1270 MobiDBLite consensus disorder prediction 589 627 - -
Car07g03156 1270 MobiDBLite consensus disorder prediction 522 554 - -
Car07g03156 1270 CDD NBD_sugar-kinase_HSP70_actin 874 1037 - -
Car07g03156 1270 Gene3D - 836 1250 - -
Car07g03156 1270 PANTHER POLY A POLYMERASE 14 600 - -
Car07g03156 1270 Pfam Poly(A) polymerase predicted RNA binding domain 370 428 IPR007010 GO:0003723|GO:0043631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03156 Car-Chr7 58806096 58817550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03156 K14376 - gmx:100783237 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03156 07 58806096 58817550 Car07g03156 07 58806096 58817550 ECH