Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03134 ATGTTTCTGCCAACCACTGGAATAGGGATGAATTCTGCAATGGATGATATGAATTTAATTCAGCAAGCACAGAGGCATCACTTGGTTGTGAGGGAGATTGGTGAAGAGATTGATTTAGAAATCGGACCTGGGGAAGATGATCCTTCATTTGGCAATACTACACTAATTGGTGCACCGTTGCGGGAATCTTCTGCGGAAGAGCATGGTGAGAGCAAGCAGATGATGGGGGTTTCTCAGATTTCTAATGATGCTCAAGATATGTCTCAGACCCAACAGGTGAAAAGGAAGAAAAAGGTTGTTAAAAGATGGAGAGAGGAATGGGCAGACACTTACAAATGGGCTTATGTCGATGTGAAAGACGGGACACCGAGGATTTTCTGCTCTGTCTGCAGGGAATTCGGCCGTAAGCATAGAAGAAATCCTTATGGGAATGAAGGCAGTCGGAATATGCAGATGAGTGCCCTCGAAGAACACAATAATAGTTTGCTTCATAAAGAGGCTCTTCGTCTTCAATCGGCCTCCAAAGATAAAATTATAGCTGACAAGCCCGTTTATGTAAAAGCTGTAATGTCAAAAACAGCGGGATCAATTCTTGAAGCTACACTCAAAAGGGATCCTCATGAGGCTGAATTCATTCAGGCAGTCCAGGAGGTAGTTCAAGCTCTTGAGAGAGTCATCGGGAAAAATTCTCATTATGTTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTATTTTCCGAGTTCCATGGGTGGATGATAGGGGTGAGACACACATTAATCGGGGGTTTCGGGTACAATTTAACCAGTCAATGGGTCCATGCAGGGGTGGCATTCGTTTTCATTCAACAATGAATTTAAGTATTACCAAATTCCTTGGCTTTGAGCAGACCTTAAAGAATGCTTTATCACCTTACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAGAAGTGATAATGAGGCAAGTTATCAATTTTGCCAGAGTTTAATGACTGAGATGTTTCGATACCTTGGTCCTGACAAGGACCTTCCATCAGAGGACATGGGTGTTGGTACTCGTGAGATGGGATATCTTTTTGGACAGTATAGACGTCTAGCTGGTAATTTTCAGGGAACTTTTACAGGGCCAAGAATATTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTCATGCTATCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTAGTGAGTGGTTCTGGAAAGATTGCATTGCATGTTTTAGAGAAGCTAATTGCATATGGTGCTCTTCCTATTTATAATTTATCAGATTCTAGGGGCTATTTGGTTGATGAAGATGGATTTGACTACATGAAAGTACAATTTTTGAGAGACATCAAAGCTCAGCATAGAAGTTTGCGAGACTATTCGAAGACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCTTGGAGTGAAAGGTGCGATCTTGCATTTGCTTGTGCAACACAGAATGAGATTGATCAATCTGATGCCATGAATTTGGTTAATTCAGGCTGTCGTATACTAATAGAAGGTAGTTCAAACATGCCATGTACTCCTGATGCAGTTCAAGTTCTGAGGAAAGCTAATGTTCTTGTTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTAGCTGGAGAACTTGAATTGAATCACGAGTGCAGTTTGATGCACTGGTCACCAGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAAAGAGCTATAAAAGCTGCAACTGATTTTGGCTATCAAAAAGAAAGCCCTGAGGCTTTGGTACATGGAGCGGTTATCTCTGCCTTTCTAACTATTGCTCAAGCCATGACTGATCAAGGCTGTGTATAA 1923 0.4217 MFLPTTGIGMNSAMDDMNLIQQAQRHHLVVREIGEEIDLEIGPGEDDPSFGNTTLIGAPLRESSAEEHGESKQMMGVSQISNDAQDMSQTQQVKRKKKVVKRWREEWADTYKWAYVDVKDGTPRIFCSVCREFGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQSASKDKIIADKPVYVKAVMSKTAGSILEATLKRDPHEAEFIQAVQEVVQALERVIGKNSHYVNIMERLLEPERMIIFRVPWVDDRGETHINRGFRVQFNQSMGPCRGGIRFHSTMNLSITKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGRSDNEASYQFCQSLMTEMFRYLGPDKDLPSEDMGVGTREMGYLFGQYRRLAGNFQGTFTGPRIFWSGSSLRPEATGYGLVFFAQLMLSDMNKELKGLRCVVSGSGKIALHVLEKLIAYGALPIYNLSDSRGYLVDEDGFDYMKVQFLRDIKAQHRSLRDYSKTYARSKYYDEAKPWSERCDLAFACATQNEIDQSDAMNLVNSGCRILIEGSSNMPCTPDAVQVLRKANVLVAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGCV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03134 640 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 389 638 IPR006096 GO:0006520|GO:0016491
Car07g03134 640 PANTHER BNAA06G02140D PROTEIN 6 640 - -
Car07g03134 640 Gene3D - 395 562 - -
Car07g03134 640 SMART ELFV_dehydrog_3 390 638 IPR006096 GO:0006520|GO:0016491
Car07g03134 640 Gene3D Glutamate Dehydrogenase, chain A, domain 3 569 640 - -
Car07g03134 640 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 196 382 IPR046346 -
Car07g03134 640 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 242 370 IPR006097 GO:0006520|GO:0016491
Car07g03134 640 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 421 441 IPR006095 GO:0006520|GO:0016491
Car07g03134 640 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 560 571 IPR006095 GO:0006520|GO:0016491
Car07g03134 640 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 379 401 IPR006095 GO:0006520|GO:0016491
Car07g03134 640 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 299 313 IPR006095 GO:0006520|GO:0016491
Car07g03134 640 Gene3D Glutamate Dehydrogenase, chain A, domain 3 196 239 - -
Car07g03134 640 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 6 640 - -
Car07g03134 640 Gene3D Leucine Dehydrogenase, chain A, domain 1 240 376 - -
Car07g03134 640 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 389 638 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03134 Car-Chr7 58570197 58578373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03134 224 517 EF-hand Containing Proteins AT5G07440 28.231 3.19e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03134 K00262 - gmx:100788009 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03134 07 58570197 58578373 Car07g03134 07 58570197 58578373 ECH