Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03107 ATGGAGAATAGTGAGACTTGTTGTTCAACTCAGCTTATTGATGGAGATGGCATATTCAATGCTACTGGAATTGACAAGTTTATGAAGGAGGTGAAATTGGGTGAATGTGGACTTTCATATGCTGTAGTTTCTATTATGGGGCCACAGAGTAGTGGCAAGAGTACACTATTAAACAATTTGTTTAGTACTAATTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCGGGCATTGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGACGGAAGAGAACGTGGAGAGGATGATACTGCATTCGAAAAGCAGAGTGCTCTGTTCGCTCTTGCTGTCTCAGATATTGTGCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTTTTGAAAACTGTGTTTCAGGTTATGATGAGATTGTTTAGTCCACGCAAAACAACAATGTTGTTTGTCATACGTGATAAAACAAGGACACCACTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCCCACAAGGAAACTCCACTAAGTGAATTTTTCAACGTTGAAGTTGTTGCGCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTCAGGGAGCAGGTTGCCAGCTTGAGGCAGCGTTTCCATCATTCCATTGCTCCTGGTGGACTTGCCGGGGATCGGCGTGGAGTAGTTCCAGCTTCTGGCTTTTCTTTTAGTGCTCAGCAAATATGGAAAGTCATTAAGGAAAACAAAGATCTCGACCTTCCTGCACATAAGGTTATGGTTGCAACTGTACGATGTGAAGAAATTGCCAATGAGAAATATGCTTCTTTTGTTGCAAATGAGGAATGGTGTCAATTGGAAGAGGCTGTGCAATCTGGTCCTATTCCTGGATTTGGGAAAAAGATCAATTCACTCCTTCGAGCTTGTTTGTCAGAGTATGATGCTGAGGCCACTTATTTCGATGAAGGTGTAAGATCTTCAAAACAAAAGCAACTTCAAGATAAATTGTTGCAACTTGTCCAACCAGCGTTCCAATCTGCGCTGGGACATATTAGATCTGTAACTTTGGACAAATTCAAGGAGACATTTGAAAAGGCTTTGAAAGGAGGGGAAAGGTTTTCTCCAGCTGCTAATACTTGCATTGAGTCTTGTATGGCTCAATTTGATGAAGCAAGTGCAGATGTTGTTATTGAACAAGCAAATTGGGATGCATCTAAAGTACGAGAGAAACTGTTGCGTGATATTGATGCTCATGTTGCATCTGTGCGCGAAGCTAAGATTTCTGAACTTACTTCTTCATATGAGGACAAACTGAAAATAGCTTTGTCTGGACCCGTCGAAGCTCTTTTAGATGGAGCTAATAGTGATACTTGGCCATCAATAAGGAACCTTCTTAAGCGTGAGATTGAATCATCAGTTTTAGGGTTTTCTGCTGCGCTTAATGGGTTTGATATGGATGAAGAAACAAGACAAAACATGATTTTGAGTTTAAAGGATTATGCAAGGGGTGTGGTAGAAGGAAAGGCTAAGGAAGAAGCTGGAAGGGTTCTGATCCGTATGAAGGACAGGTTTACAATGTTATTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGGAAGGAAGATATTCGAGTCATCACTAAAACTGCTCGCTCTGCTTCTTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATGGTGATACAGATGATATTGAGAAAACATTAGCAGTTGCATTGTTGGATCCATCAAGCAATTCTGTTAAAGATAGGAGTATCACAGCAGTTGATCGGTTAGCTTCTAGTAGTTGGGAAAAGGTTCCATCAACTAAGACATTGATTACACCTGTCCAGTGCAAATCTTTGTGGAGACAATTCAAGATGGAGACTGAGTACAGTGTTTCTCAAGCCATTTCGGCTCAGGAGGCCAATAAGCGTAATAACAACTGGTTACCTCCCCCATGGGCAATACTTGCTTTGGTTGTTCTTGGATTCAATGAATTTATGACCCTTCTAAAAAACCCCTTGTATCTGGGTGTCATCTTTGTTGTTTTTCTTCTCCTTAAAGCCCTGTGGGTGCAACTTAACATTGCCGGTGAATTTCGCCATGGAATTCTTCCAGGACTCATTTCCTTGTCTACCAAGTTTGTTCCAACTATCATGAACCTTATCAAAAGACTAGCAGAGGAGGGACAGAACCCTACAGCTAACAATCCTCAAAGAACCTCATCCAAAAACAACACCTCCAATGCTGTTCCTGTTGGTAGTTCTGCATCATCTAGTGCTTCATCTAACTTAACATCGTTGGATAACGGAAACAGATATACCGGTTCGTCAAAAGACGAGTAA 2439 0.4137 MENSETCCSTQLIDGDGIFNATGIDKFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNNLFSTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFREQVASLRQRFHHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYASFVANEEWCQLEEAVQSGPIPGFGKKINSLLRACLSEYDAEATYFDEGVRSSKQKQLQDKLLQLVQPAFQSALGHIRSVTLDKFKETFEKALKGGERFSPAANTCIESCMAQFDEASADVVIEQANWDASKVREKLLRDIDAHVASVREAKISELTSSYEDKLKIALSGPVEALLDGANSDTWPSIRNLLKREIESSVLGFSAALNGFDMDEETRQNMILSLKDYARGVVEGKAKEEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGKEDIRVITKTARSASLKLLSVMAAIRLDDGDTDDIEKTLAVALLDPSSNSVKDRSITAVDRLASSSWEKVPSTKTLITPVQCKSLWRQFKMETEYSVSQAISAQEANKRNNNWLPPPWAILALVVLGFNEFMTLLKNPLYLGVIFVVFLLLKALWVQLNIAGEFRHGILPGLISLSTKFVPTIMNLIKRLAEEGQNPTANNPQRTSSKNNTSNAVPVGSSASSSASSNLTSLDNGNRYTGSSKDE 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03107 812 CDD GBP 36 239 - -
Car07g03107 812 Hamap Protein SEY1 [SEY1]. 9 765 IPR008803 -
Car07g03107 812 PANTHER PROTEIN SEY1 3 790 IPR008803 -
Car07g03107 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 276 IPR027417 -
Car07g03107 812 Coils Coil 218 238 - -
Car07g03107 812 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 3 790 - -
Car07g03107 812 MobiDBLite consensus disorder prediction 761 812 - -
Car07g03107 812 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Car07g03107 812 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Car07g03107 812 MobiDBLite consensus disorder prediction 761 805 - -
Car07g03107 812 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Car07g03107 812 Gene3D - 19 250 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03107 Car-Chr7 58223208 58232532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03107 K22698 - gmx:100777656 1379.77