Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03095 ATGCAGGAAACTAATTTTCTGGAATTTATTCCTGTCATAAAGAGGTCTAAAGAGACAAGTTTGGCGACTCAAAATGTGTATAATTGTGTAGCGGCAGGACACCGGGACAGGCTTGGTGACATGCCCGATAGCCTTATTCATCATATTTTGTCGTATATGGAAACAAGAGATGCAGTTCGAACTTGTGCTCTATCGAAAAGGTGGAGGTATGTTTGGACTTCAGTTCCCTTCCTTCACTTTAGTAGCAGATCATTCACGCGGTTGGTTGATTTCAAGAAGTTTGTGTTGTGGGTTCTATCCCATCGCGATAATTCCAATGTAAAAGTTCTTATTTACAATCGCTTTGGGGTAGATTATGCGACAGATCAGTATCTGTTGTATAAGGTTATTGAATATGCAGCATCTCACGGTGTCGAAGAGATCAGAATTAATCTTCGGGCAAAAACCACGGGATGTCCACCGATTGCAATTCCTTTGCCTCTTTTTACTTGCCAATCCTTGAAAAAGCTCGAGTTAAAACAATGCCATCCTACAAATGTCTTGTCTCTACTCAGGTTCAAATCATTGGACATGTTGCATCTGGATCATTTTCCAATGTTTCCTACCGCAGCCGACTTTTCAAATCCTTTTGCAAGTTTGGCAGAGCTTTTCGGTTTTACAACATTGACAACTTTACATTTAAATGACTTCACCCTATGTTTTACGGGAATGGAGCGTCTTGATCCGTTTGCTAATTGTGTCAATTTGAAGAATTTGCACTTAAGTGAAATGTGCTTTAAGTCGGATTTGAGCCCTAAGGATTTCGTGATATCAGCTCCTCAACTATGTAACTTGAGTCTAGTGTTCAATCGCTTTAGATGTAAGATTTTAGTTGCTTCGCCACAGCTTCTCAATTTCACTTACTTGTACACTACACCTTCTGCATTCTTTGAGTTTAGTCTTCCTTCTTTGGATGGCTTCGCCATTGATATTCATGAATTAGCTGGCCGAATGGAAAATTACCTGTGGAAGCCAAAGGAGAAGAATTTTTATGGTTTGGTCAATATGTTACGGGAACATCAGAAAGCTGAAGCTGTTAAACTATCCTTCGGTACAGTTGCGGTTTCTTGTGGGGCTGCAGAATTAATAAAGCCAGAATGTTTGTGTTATAGTAGATGGAAGTCATTGAGCTTTGAAGTGGGATCAACATATAAAATCTTTATCGACAACCTTGACCATTTAACTGCATATTTCCGCAACTGTTCTCAGCGTCAGGATGCAGATTTTGAGATTGTGAATATTTAG 1284 0.3964 MQETNFLEFIPVIKRSKETSLATQNVYNCVAAGHRDRLGDMPDSLIHHILSYMETRDAVRTCALSKRWRYVWTSVPFLHFSSRSFTRLVDFKKFVLWVLSHRDNSNVKVLIYNRFGVDYATDQYLLYKVIEYAASHGVEEIRINLRAKTTGCPPIAIPLPLFTCQSLKKLELKQCHPTNVLSLLRFKSLDMLHLDHFPMFPTAADFSNPFASLAELFGFTTLTTLHLNDFTLCFTGMERLDPFANCVNLKNLHLSEMCFKSDLSPKDFVISAPQLCNLSLVFNRFRCKILVASPQLLNFTYLYTTPSAFFEFSLPSLDGFAIDIHELAGRMENYLWKPKEKNFYGLVNMLREHQKAEAVKLSFGTVAVSCGAAELIKPECLCYSRWKSLSFEVGSTYKIFIDNLDHLTAYFRNCSQRQDADFEIVNI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03095 427 SMART fbox_2 41 81 IPR001810 GO:0005515
Car07g03095 427 ProSiteProfiles F-box domain profile. 35 88 IPR001810 GO:0005515
Car07g03095 427 SUPERFAMILY F-box domain 34 111 IPR036047 GO:0005515
Car07g03095 427 Gene3D Ribonuclease Inhibitor 135 318 IPR032675 -
Car07g03095 427 PANTHER F-BOX PROTEIN-LIKE 23 427 - -
Car07g03095 427 SUPERFAMILY RNI-like 148 294 - -
Car07g03095 427 Pfam F-box domain 40 77 IPR001810 GO:0005515
Car07g03095 427 Gene3D - 24 75 - -
Car07g03095 427 PANTHER CYCLIN-LIKE F-BOX 23 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03095 Car-Chr7 58118443 58122161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03095 30 199 EF-hand Containing Proteins AT5G41840 26.562 6.26e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03095 - - vun:114167379 598.971