Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03075 ATGGCATCTCATTTACTTAATCACTCCAAAAAGTTACGAAATGCTTCGAGTTTGTTACACAACGAGCGTGCCCTTTTGGTTCGTTGGTTTTCCAGAGATGTTCAAGCTTCTTCTATCAACACAAATCGAGATGTGCTGAAAACCCGATTACAAGACTATGAATCTTCAGCGAGAAACCGTGTCTCTGAATCAGCCCCCAACTTTACTAAGAGAAACATGTCCACCATGAAAAGGGGTTACATGAGGGGGTCCTTGTTTAATGGAGAGGTTTCACAAAATTCACAGGTTTTGTCAAGGAGAAGCTATGCATCGGCTTCAGATCTCCCCCCACACCAGGAAATTGGAATGCCTTCTCTCTCACCTACAATGACAGAGGGTAACATTGCAAGATGGTTGAAGAAAGAAGGTGATAAGGTTTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACAGTTGAAATGGAATGCATGGAAGAAGGTTATCTGGCCAAAATAGTACGTAAGGATGGGGAAAAAGAAATTAAAGTTGGTGAGGTAATTGCCATAACTGTTGAAGATGAGGAGGACATTGCAAAATTTAAAGATTACCAAGCTTCAGCATCTGAATCTAGTGACCCCCCTGCCAAAGAAGCCTCTGCCCCACCTCCCCCAAAGAAAGAGGTGGCAGAAGAGCCTGCTCGAGAACCTGAAACAAAGGTTTCTAAACCCAGTGCACCACCTTCATCTGGAGATCGCATATTTGCTAGTCCCCTTGCTAGAAAGTTGGCTGAAGAGAAAAATGTGCCTCTCTCCAGCATTAAAGGAACAGGAGCGGATGGGCTCATTGTCAAGGGTGACATTGACGATTACTTGGCTTCTGGTGCTAAAGAAGCTTCAGCACCCTCAAAAGCCAAGGCTGCAACAGGTGCATCACTGGATTATACCGACATTCCTGTCTCTCAGATAAGGAAGGTCACAGCTTCACGTTTATTGCTATCAAAACAAACTATTCCTCATTACTATTTAACAGTAGATACATGTGTTGACAAACTCATGAGTTTGCGTACCCAACTCAATTCACTGCAGGAAGCCTCTGGTGGGGCTCGCATATCAGTAAACGACCTTGTAATCAAGGCTGCTGCATTGGCTCTCCGTAAAGTTCCTCAGTGTAACAGCTCATGGACAAATGATTATATTCGCCAGTATCATAATGTGAATATCAATGTTGCCGTGCAGACGGATCATGGACTCTTTGTTCCCGTTGTCAGGGATGCAGACAAAAAAGGCCTATCTACAATAGGGGAAGAGGTCAAACAATTGGCAAAGAAAGCCAAAGAAAACAGCTTGAAACCCCAAGATTATGAGGGAGGTACATTTACAGTGTCCAACTTGGGAGGGCCATTTGGTGTCAAACAGTTCTGTGCCATTGTCAATCCTCCTCAATCAGGCATTCTTGCCGTTGGATCTGCTGAGAGGCGGGTCGTTCCAGGTTCAGGTGCTGAAGAATTCAAGTTTGCTTCCTTCATGGCCGTGACCCTCAGCTGTGATCACCGTGTAATAGATGGGGCAATTGGTGCTGAATGGTTAAAAGCATTCAAAGGCTATATTGAGAATCCAGAATCGATGTTGTTGTAA 1623 0.4436 MASHLLNHSKKLRNASSLLHNERALLVRWFSRDVQASSINTNRDVLKTRLQDYESSARNRVSESAPNFTKRNMSTMKRGYMRGSLFNGEVSQNSQVLSRRSYASASDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVRKDGEKEIKVGEVIAITVEDEEDIAKFKDYQASASESSDPPAKEASAPPPPKKEVAEEPAREPETKVSKPSAPPSSGDRIFASPLARKLAEEKNVPLSSIKGTGADGLIVKGDIDDYLASGAKEASAPSKAKAATGASLDYTDIPVSQIRKVTASRLLLSKQTIPHYYLTVDTCVDKLMSLRTQLNSLQEASGGARISVNDLVIKAAALALRKVPQCNSSWTNDYIRQYHNVNINVAVQTDHGLFVPVVRDADKKGLSTIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIVNPPQSGILAVGSAERRVVPGSGAEEFKFASFMAVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03075 540 MobiDBLite consensus disorder prediction 219 234 - -
Car07g03075 540 PANTHER DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX 47 540 - -
Car07g03075 540 Gene3D - 292 538 IPR023213 -
Car07g03075 540 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 3 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL 47 540 - -
Car07g03075 540 ProSiteProfiles Biotinyl/lipoyl domain profile. 111 187 IPR000089 -
Car07g03075 540 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 309 540 IPR001078 GO:0016746
Car07g03075 540 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 243 288 IPR036625 GO:0016746
Car07g03075 540 CDD lipoyl_domain 112 185 - -
Car07g03075 540 MobiDBLite consensus disorder prediction 200 249 - -
Car07g03075 540 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 250 287 IPR004167 GO:0016746
Car07g03075 540 Gene3D - 106 211 - -
Car07g03075 540 SUPERFAMILY Single hybrid motif 110 205 IPR011053 -
Car07g03075 540 Pfam e3 binding domain 249 283 IPR004167 GO:0016746
Car07g03075 540 TIGRFAM PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 113 540 IPR006257 GO:0004742|GO:0006090|GO:0045254
Car07g03075 540 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 136 165 IPR003016 -
Car07g03075 540 Gene3D - 238 291 IPR036625 GO:0016746
Car07g03075 540 SUPERFAMILY CoA-dependent acyltransferases 309 540 - -
Car07g03075 540 Pfam Biotin-requiring enzyme 113 185 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03075 Car-Chr7 57810895 57817573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03075 2 540 Acyl Lipid Metabolism Gene Families AT1G54220 68.174 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03075 K00627 - gmx:100778218 848.195