Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03069 ATGTCCATTGACGGGAGTTTTAGTGTTCATTTGGCGCTTCGGAGATTGCTTGATCGTTGCCCAAAGCTTCAATCTTTTCCTCAAATTGATTCATTGACTCAGAAGGGGAACTTGGTCACGGAGGAGGAAGTGGTTAATGTCTTAGTGGGGTTTTTTCTGCATCCTAGTTATACAATTCCATTGATGGGATGTTTCCGGGCAATTGCTCGAAATTTTGTTGATAAAGCTGTTGCTTTACTTCGTTTAGTACCGAATTTGAGGTCTAATACTGTGGATGATGCTATGGAAATTGACTCTGACATTGTCTTGGATGATGTTGGCAATGTTGTAGAATACTATGTTGAACGGGGAAGGGGTCTTGATCTTCATGAACATGCTTGTTTAGCCTTCTGTCGTGCTCTTGACATGTGTTCTTTTCTGCTGAGTTCTGTATTAAGCTATTTCAATTTTGCACCTGCTCCTTTTGAAAGATTTTCAGGGAAACAAGTTATGGTTGAGCCCCATGGATTGCGTGTTGCTCGAATATCGTACCGCATCCTTCTTTTGGAACCTGAAGTTTTCTCAAATTTTTGGGACTGGTCTTGTTTTCTAGAACTCTTAAAAGAGCCATGCAAATCAGACATGATATGGTGCATGGTTCAGATATTAAGAGTTGTGCTCAAACTAGGCTCAGGAGCCAGTGAAAGCTTGCAAAGCTTGAATATTGAAGATCAGGAAGCAAATGCATGTTTATTGCGTTGGGAAGAGTTTTGTGGGGACACATCACTAGAGAAAGCTGGTTGGTTTGTTGAACCACCAGCAGACTACGTGTCTGATTCTCCTAATAGAAGCATGGAATTCAATCAAGAGAACTGTTTAAGTTGCTTAAGATTTAATTCTCATCCTGCTGGTTCACCAAAGGATCACGAGTTGCAGCCACCTTTTAAGAGTAAACGGATCACTGCAAGGGATAATATATCAGTCAGTTATACATTCATATTGACATCAGCAGTGAAGAAAAGTTATGAAAGAGTTCTATTGGCAGTGAGTCAGAAGTGGCCTGTTCTTTTATATGGTCCCTCTGGTTCTGGAAAATCCGCTCTCATTGCTAAGCTGGCCGAGGATAGTAATAACCGAGTTCTATCTATCCAGATGGATGATCAGATCGATGGTAGAACATTGGTTGGGGGATATGTCTGTACGGATAGGCCCGGGGAGTTTAGGTGGCAGCCTGGGTCACTTACCCAGGCTGTGCAGAATGGTTTTTGGATTGTTTTTGAAGATATTAACAAAGCCCCATCTGATGTACACTCCATTTTATTGCCTTTATTGGAAGGAGCTGATTCATTTATGACTGGACATGGGGAGGTAATAAAGGTGGCAGAGAGCTTTAGGATGTTTTCAACTGTTGCTGTTTCTAAGTTTGACTCTTCTGAGAGCGCAGATTCACTTAGTGTCCTTTGGAGAAGAATAATAATTCAACCACCGGATAATAAAGATTTGCAAGAGATAGTCAAAGTGAGGTATCCTGATTTGGGGCTTCATGCAGGCAAACTCATAGAAACCTTTGAAAGAGTCAACACTATTTCCATGTTTCAAATTTTGGGGTTTCACCCTGAATGCTCTTCTGTCTATTGTCTCGGCAGGTTCTCGTTAAGGGATCTCTTTAAATGGTGCAAAAGGATTAGTGGTTTAGGTTTTTGCCTAGATGATAGCTTGTCAGAAGGGCAATGTAATTCTATATATACAGAGGCTGTTGATGTATTCGCGGCCTTCCCTGCTTCATTTGAACACCGGTTATCAATAATGAAAGAGATAGGAAAGTTGTGGAAAGTACGAGATTCTGCAGCTGAGACCTTACTTCCAGTTGACAAACCAATATATCAGGATTGTGTCACAGGTTTAAGAATAGGCCGGGTTTCCCTCCAGTATACAAAAGAACCTTCACAGGAACACAGAATACCTTTTGTTGAGATCCGTAGTTCTTTGTATGTATTAGAGCGCATAGCTTGCTCTGTCAAGCATAATGAACCTGTACTCTTGGTTGGTGAAACTGGTACTGGAAAGACTACACTTGTTCAAAATTTGGCTTTAAGGCTTGGCCAGAAGCTTACTGTTTTGAACATGAGTCAGCAAAGTGATGTTGCTGACTTACTTGGAGGATTCAAGCCTGTAGATGCACAGTTCGTGTATTCCCGTCTTtataaggaatttgtgactctcttcaaaaagacgtttcctggaaagAAAAATTTAAACATTCTGGGACGTTTATTGGAGTTTTTAAAACATAAGAATTGGGAAATGCTGCTTGGAGGTTTTCAAAAGGCAGTGGAGAGATCACGAGAACTTATAAGTATTGGACCATCCGGAAAACGTAAAAGGCCATTAACAGAAGAGATATTCCAATCTTGGGATATATTCTCAATAAAACTTGACAGTGTCTGTCAAATTAATCCTTCTTCTGGGATGATGTTTTCCTTTGTAGAGGGAAGTTTCGTAACTGCTCTTAGAAATGGTGAGTGGATTTTGCTTGACGAGGTGAATTTGGCTCCTCCAGAAACCTTGCAAAGAATAATTGGTGTTTTAGAAGGGGAAAATGGGGCACTCTGTTTAGCTGAAAGAGGTGATATTGATTATATACACCGTCATGCAAATTTTCGTATATTTGCTTGCATGAATCCGGCAACTGATGCTGGGAAACGGGATTTGCCCTTTTCATTGAGAAGTAGATTTACTGAATATTTTGTTGATGATGTTTTGGACGATGATGATTTATGTCAGTTTATTAGTCAGTTCATTAACAGTCATATGGATCGACAGTTGGTGAATAAAATTGTGCGTTTCTATAAAGAATCAAAAAAGGAATCTGAAGAGAGGCTGCAGGATGGTGCTAATCAGAAACCTCAATATAGTTTAAGGTCCCTTTATCGTGCTCTTGAATATATAAGGAAGGCAGAGAGGAAATTTGGATTTCAGAAGGCTTTATATGACGGCTTTAGTTTGTTTTTCCTCACATTGTTGGATGGACCTAGTGCTGAACTAATGAGGCAAAAGATATTGTCTCTTTTATTAGGGGGGAATATGCCTTCACATGTACCTTTTGACAGATATTTAAGTACCTTCAAATCCAATGGATATTCTGGGAACTATGTTAAAACTAAAAGTGTCCAGGAGCATCTTGGTAATTTGGCTCGTGCTGTTCTAATAAAGAGATACCCTGTTCTCTTACAAGGACCAACGTCTAGTGGGAAAACTAGCCTTGTTCAGTATCTTGCTGCAGTAACTGGGCATGAGTTTGTAAGAATCAATAATCATGAACACACCGATTTGCAGGAGTATCTAGGTTCTTATATAACCGATGCTAGTGGAAAGCTTGTTTTCAATGAAGGTATTTTGGTTAAAGCTGTAAGAAACGGCTACTGGATTGTACTGGATGAGCTTAACTTGGCTCCATCTGATGTGCTGGAATCATTGAACCGATTACTTGATGATAACAGAGAGCTTTTTGTTCCCGAACTTCAAGAAACAATTAAAGCGCATCCAGATTTCATGCTATTTGGAACTCAAAATCCGCCTACACATTATGGTGGGCGAAAACTATTGTCTCGGGCATTTCGCAACCGTTTCATAGAGATTCAAGTTGGTGAGATTCCAGATGACGAGCTGAGCAAAATATTGGGGGATAGATGTGAAATTCCATTTAGTTATGCCACAAAAATGGTTGAAGTAATGAAGGAGCTTCGGATGCACAGACAGAGTACCAGAGTTTTTGCTGGGAAACATGGATTTATAACTCCTCGGGACTTGTTTCGTTGGGCTGATCGTTACAAGAGATTTGGTAAGTCTTATGAAGATTTGGCCAAAGACGGTTATTATCTTTTGGCAGAAAGGCTACGGGATGAGGATGAGAAATCTGTTGTTCAGAAAGTTCTGGAAAAACATCTTCGGGTTAAACTAAACATGAAAAATTTATATGATCAGATATTGTCTGAAGGTAGCTCTTCTTCCAATTTAATTAGTGGCTTAGGAGGTTCGAAGAGTCTTGAAAGTGTAACCCTGACCAAAAGTATGCAGAGGCTCTACTTCCTTGTGGAACGCTGCTTTGAATTACGTGAGCCTGTGCTACTTGTTGGGGAAACGGGTGGAGGGAAGACCACTGTTTGTCAGTTACTAAGTGCTTGTTTGCAGTTGAAGTTACATATCTTGAATTGTCATCAGTGTACAGAAACATCTGATTTTATAGGGGGGTTTCGTCCTATACGAGACAGATCTAGACTGAGTTTTAACTATGAAGAGATCATTGAACAGTTGAAGAAACTAAAGGCTTTTACATGTTATCCTGAAGACCCTCTACCATTTATTTCTTCCGACATAGATCAAGCTTCTTCAACTATTGATCGGCTGAATAGTATGATGAGGAACTATGAAGAGGGTCAAGTTCGTAGTGCTGATGTCAGCAAAGAAGACCTATATGCTTTTGAGAAATTAAAATTGAGCCTTGATGTCTTGCATCAAAAGTGGCAGAGTATATTTGAGTGGCAAGATGGTCCCCTTGTAAAAGCAATGAGAGACGGTGATCTCTTTCTTGTGGATGAAATATCCTTGGCTGATGATAGTGTACTTGAGAGACTGAATAGTGTGTTGGAGCTAGAAAGGACACTATCTTTGGCTGAGAAAGGAGGGCCTGATCTGGAAAAAGTTACGGCAAATTCAAATTTCTTTGTTCTGGCAACAATGAACCCTGGTGGTGATTATGGTAAGAAAGAGCTGTCTCCAGCACTACGCAACCGCTTCACAGAGATATGGGTTCCCCCTGTTATTGATCTAGACGAGCTTCAAGGAATTGCTCTGAAAAGAATTTCCAAGTTTGAAGTTGCAGGCAATTTAGGTCCCACTTATCAAGAAAGACTATTACTCATTGTTAATGCTATGATTAGTTTCTGGGAGTGGTTCAACAAATTACATCCTGGGCGGTTGCTTACCGTCAGAGATCTCATTTCCTGGGTTGCTTTTTTCGATGTAACGGAAGAAAGCTTAGGACCTGAACACGCACTTCTTCATGGAGCATTTCTTGTGTTGCTTGATGGGTTAAGTCTAGGGACAGGAGTTTCAAAAAAGGATGCTGGAGTGCTAAGGGAGAGTTGTTTATCCTTTCTTCTACAAAAGCTGAGGGTTAATTAA 5163 0.3996 MSIDGSFSVHLALRRLLDRCPKLQSFPQIDSLTQKGNLVTEEEVVNVLVGFFLHPSYTIPLMGCFRAIARNFVDKAVALLRLVPNLRSNTVDDAMEIDSDIVLDDVGNVVEYYVERGRGLDLHEHACLAFCRALDMCSFLLSSVLSYFNFAPAPFERFSGKQVMVEPHGLRVARISYRILLLEPEVFSNFWDWSCFLELLKEPCKSDMIWCMVQILRVVLKLGSGASESLQSLNIEDQEANACLLRWEEFCGDTSLEKAGWFVEPPADYVSDSPNRSMEFNQENCLSCLRFNSHPAGSPKDHELQPPFKSKRITARDNISVSYTFILTSAVKKSYERVLLAVSQKWPVLLYGPSGSGKSALIAKLAEDSNNRVLSIQMDDQIDGRTLVGGYVCTDRPGEFRWQPGSLTQAVQNGFWIVFEDINKAPSDVHSILLPLLEGADSFMTGHGEVIKVAESFRMFSTVAVSKFDSSESADSLSVLWRRIIIQPPDNKDLQEIVKVRYPDLGLHAGKLIETFERVNTISMFQILGFHPECSSVYCLGRFSLRDLFKWCKRISGLGFCLDDSLSEGQCNSIYTEAVDVFAAFPASFEHRLSIMKEIGKLWKVRDSAAETLLPVDKPIYQDCVTGLRIGRVSLQYTKEPSQEHRIPFVEIRSSLYVLERIACSVKHNEPVLLVGETGTGKTTLVQNLALRLGQKLTVLNMSQQSDVADLLGGFKPVDAQFVYSRLYKEFVTLFKKTFPGKKNLNILGRLLEFLKHKNWEMLLGGFQKAVERSRELISIGPSGKRKRPLTEEIFQSWDIFSIKLDSVCQINPSSGMMFSFVEGSFVTALRNGEWILLDEVNLAPPETLQRIIGVLEGENGALCLAERGDIDYIHRHANFRIFACMNPATDAGKRDLPFSLRSRFTEYFVDDVLDDDDLCQFISQFINSHMDRQLVNKIVRFYKESKKESEERLQDGANQKPQYSLRSLYRALEYIRKAERKFGFQKALYDGFSLFFLTLLDGPSAELMRQKILSLLLGGNMPSHVPFDRYLSTFKSNGYSGNYVKTKSVQEHLGNLARAVLIKRYPVLLQGPTSSGKTSLVQYLAAVTGHEFVRINNHEHTDLQEYLGSYITDASGKLVFNEGILVKAVRNGYWIVLDELNLAPSDVLESLNRLLDDNRELFVPELQETIKAHPDFMLFGTQNPPTHYGGRKLLSRAFRNRFIEIQVGEIPDDELSKILGDRCEIPFSYATKMVEVMKELRMHRQSTRVFAGKHGFITPRDLFRWADRYKRFGKSYEDLAKDGYYLLAERLRDEDEKSVVQKVLEKHLRVKLNMKNLYDQILSEGSSSSNLISGLGGSKSLESVTLTKSMQRLYFLVERCFELREPVLLVGETGGGKTTVCQLLSACLQLKLHILNCHQCTETSDFIGGFRPIRDRSRLSFNYEEIIEQLKKLKAFTCYPEDPLPFISSDIDQASSTIDRLNSMMRNYEEGQVRSADVSKEDLYAFEKLKLSLDVLHQKWQSIFEWQDGPLVKAMRDGDLFLVDEISLADDSVLERLNSVLELERTLSLAEKGGPDLEKVTANSNFFVLATMNPGGDYGKKELSPALRNRFTEIWVPPVIDLDELQGIALKRISKFEVAGNLGPTYQERLLLIVNAMISFWEWFNKLHPGRLLTVRDLISWVAFFDVTEESLGPEHALLHGAFLVLLDGLSLGTGVSKKDAGVLRESCLSFLLQKLRVN 1720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03069 1720 CDD AAA 347 451 - -
Car07g03069 1720 ProSitePatterns Sigma-54 interaction domain ATP-binding region A signature. 672 685 IPR025662 -
Car07g03069 1720 Gene3D - 1342 1596 IPR027417 -
Car07g03069 1720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 584 IPR027417 -
Car07g03069 1720 Gene3D - 656 921 IPR027417 -
Car07g03069 1720 PANTHER MIDASIN-RELATED 325 1623 - -
Car07g03069 1720 CDD AAA 1051 1206 - -
Car07g03069 1720 Coils Coil 1452 1472 - -
Car07g03069 1720 SMART AAA_5 344 469 IPR003593 -
Car07g03069 1720 SMART AAA_5 668 914 IPR003593 -
Car07g03069 1720 SMART AAA_5 1064 1213 IPR003593 -
Car07g03069 1720 SMART AAA_5 1364 1602 IPR003593 -
Car07g03069 1720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1350 1662 IPR027417 -
Car07g03069 1720 Pfam Midasin AAA lid domain 918 1018 IPR041190 -
Car07g03069 1720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 660 979 IPR027417 -
Car07g03069 1720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1039 1302 IPR027417 -
Car07g03069 1720 Gene3D - 1050 1221 IPR027417 -
Car07g03069 1720 Gene3D - 330 499 IPR027417 -
Car07g03069 1720 Pfam AAA domain (dynein-related subfamily) 671 731 IPR011704 GO:0005524|GO:0016887
Car07g03069 1720 Pfam AAA domain (dynein-related subfamily) 816 905 IPR011704 GO:0005524|GO:0016887
Car07g03069 1720 Pfam AAA domain (dynein-related subfamily) 1367 1432 IPR011704 GO:0005524|GO:0016887
Car07g03069 1720 Pfam AAA domain (dynein-related subfamily) 1067 1203 IPR011704 GO:0005524|GO:0016887
Car07g03069 1720 Pfam AAA domain (dynein-related subfamily) 347 480 IPR011704 GO:0005524|GO:0016887
Car07g03069 1720 Pfam AAA domain (dynein-related subfamily) 1501 1592 IPR011704 GO:0005524|GO:0016887
Car07g03069 1720 Pfam Midasin AAA lid domain 493 604 IPR040848 -
Car07g03069 1720 Pfam Midasin AAA lid domain 1215 1311 IPR040848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03069 Car-Chr7 57747443 57765284 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03069 K14572 - gmx:102663906 2563.87