LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car07g03039	ATGGCCGAAAACCCAATCGGATCATCACCTTCCACCATGGACCCTCAAACTCAAAACCCCTCTTCATCAAACCCTAATATCCCATCCCCTTCACCAATTCCCCAACAACAATCTCCTTCAATTCACATGTCATCTTCATCACCTTCTCTCCCTCCTCTCCCTCAAGACCAATTACAACAACATTCACAGTTACAAGGCATCAATAACATTAACCCTAACCCTAACCCTAACGTTTCCACTTTTCAACTTCAACAAACGCTTCAGCGTTCTCCTTCTATGTCCCGCCTAAATCAAATTCAACCTCAGCAACAGCAGCAAGTTGCTAGGCAGCAATCTGGACTTTATGGTGGGCAGATGAGTTTTGGTGGATCCGGTGCTGTCTCTGCTCAGCAACAGCAATTAAGTGGCGGTGTTGGTGTTGGCATCGGCGGTGGTGCATCCAACTTGTCGCGATCAGCGTTGATGGGACAGAGTGGTCATTTCCCTATGTTGTCTGGCGCAGGAGGAGCACAGTTTAACCTATTATCGTCGCCGAGGCAGAAAGGTGGGTTGGTGCAATCCTCACAATTTTCTTCAGCTAATTCTGCTGGACAGTCACTGCAAGGAATGCAACAGGCCATAGGGATGATGGGATCGTCCAATCTAGCACAACTGAGGGCTAATGGAGCTCTTTATGCTCAGCAGCAGCTCCGAATGACTTCGGGCCAAATCAGGCAGCAGCTCTCACAGCAGGCTTCGCTTAACAATCAACAGGTTCAAGGTTTACCAAGGTCGTCATCCCTTGCTTTTATGAATTCCCAGTTGTCTGGGTTGTCTCAGAATGGACAGCCTGCCATGATGCATAACTCTTTAACACAGAATCAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCTCTCCGCTGCGTTTgcaacaacatcagaggcagcagcagctggcttcatctactcaactgcaacaaaactctatgaccctgagccaacagcaattgtcccagttgatgcagcagaaatcaatggggcagcctcagcttcatcagcagcagccatccacacaacagcaacagcaacaacttctacagcagcagcaacaacaacaatcacaactacaagcatctgttcatcagcagcaacagcagcagTCTCCAAGGATGCCAGGACCTACTGGCCAAAAGTCATTAAGTTTAACAGGATCGCAGCCAGATGCTACTGCATCTGGCACAACTACACCTGGCGGAAGTTCAAGTCAAGGAACCGAAGCAGCAACAAACCAAGTACTTGGAAAGAGAAAGATACAGGATTTAGTTGCTCAGGTGGATCCACAGGGTAAGCTGGACCCTGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTGCAACTACACACGGTTGCAATTTGGCAAAACATAGAAAATCATCAACTTTGGAGTCCAAGGATCTATTGCTACACCTAGAGAAAAATTGGGATTTGACAATTCCAGGATATTCAAGTGAAGAAAAGAAGTGCCAGAGTAGACCTCTGTCCAATGACCTTCACAAGAGGCGGCTAGATGCAGTCCGCACATTGATGGAATCTTCTTCACGCCCTGAATCAAGCATTAACAATTCTAAAGATATGAGTAGACAAGGCCATCCTAACCCTGTAGGTTCCCATCATCTAATGAGACCCCTGAGTTCAGATCAGTTGGTTTCTCATTCAACTGGTTCCCAAATGCTACAGCAGATGACGAGGTTTTAA	1755	0.404	MAENPIGSSPSTMDPQTQNPSSSNPNIPSPSPIPQQQSPSIHMSSSSPSLPPLPQDQLQQHSQLQGINNINPNPNPNVSTFQLQQTLQRSPSMSRLNQIQPQQQQQVARQQSGLYGGQMSFGGSGAVSAQQQQLSGGVGVGIGGGASNLSRSALMGQSGHFPMLSGAGGAQFNLLSSPRQKGGLVQSSQFSSANSAGQSLQGMQQAIGMMGSSNLAQLRANGALYAQQQLRMTSGQIRQQLSQQASLNNQQVQGLPRSSSLAFMNSQLSGLSQNGQPAMMHNSLTQNQWLKQMPAMSGPASPLRLQQHQRQQQLASSTQLQQNSMTLSQQQLSQLMQQKSMGQPQLHQQQPSTQQQQQQLLQQQQQQQSQLQASVHQQQQQQSPRMPGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEAATNQVLGKRKIQDLVAQVDPQGKLDPEVIDLLLELADDFIDSATTHGCNLAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKCQSRPLSNDLHKRRLDAVRTLMESSSRPESSINNSKDMSRQGHPNPVGSHHLMRPLSSDQLVSHSTGSQMLQQMTRF	584

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car07g03039	584	Coils	Coil	354	381	-	-
	Car07g03039	584	SUPERFAMILY	Histone-fold	426	497	IPR009072	GO:0046982
	Car07g03039	584	MobiDBLite	consensus disorder prediction	294	426	-	-
	Car07g03039	584	MobiDBLite	consensus disorder prediction	302	426	-	-
	Car07g03039	584	MobiDBLite	consensus disorder prediction	530	549	-	-
	Car07g03039	584	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	8	583	IPR037794	GO:0000124\|GO:0005669\|GO:0046695
	Car07g03039	584	MobiDBLite	consensus disorder prediction	526	560	-	-
	Car07g03039	584	MobiDBLite	consensus disorder prediction	1	24	-	-
	Car07g03039	584	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B	8	583	-	-
	Car07g03039	584	Gene3D	Histone, subunit A	423	498	IPR009072	GO:0046982
	Car07g03039	584	MobiDBLite	consensus disorder prediction	85	111	-	-
	Car07g03039	584	CDD	TAF12	428	496	IPR003228	GO:0005669\|GO:0006352
	Car07g03039	584	Pfam	Transcription initiation factor TFIID subunit A	429	496	IPR003228	GO:0005669\|GO:0006352
	Car07g03039	584	MobiDBLite	consensus disorder prediction	36	61	-	-
	Car07g03039	584	MobiDBLite	consensus disorder prediction	1	61	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car07g03039	Car-Chr7	57246217	57252135	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car07g03039	K03126		-	gmx:100783017	593.578

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car07g03039	07	57246217	57252135	Car07g03039	07	57246217	57252135	ECH