Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03033 ATGCATCACATTCTCATTCAAAAATCAAAAGCAAACATATTGATCATAAAAATGATTCACATAATCCTCCTCATATCTCTCCTCATAACAACAACTTCAAATGCATCAGTCCAAGATTTCTGTGTAGCAGACATAAAAGCCTCAGACACACCAGCAGGATACCCTTGCAAAGCAGCAACAACAGTAACATCAGATGACTTTGCATACTCAGGCCTAATTGAAGCAGGAAACACAACAAACATCATAAATGCAGCAGTGACACCAGCATTTGTTGCACAATTTCCAGCTCTCAATGGTCTTGGTCTCTCAGCTGCAAGACTAGACCTTGGTCCAGCTGGTGTTATCCCTTTACACACTCATCCAGGTGCTAGTGAACTTCTCATAGTGAAACAAGGTCACATCACTGCTGGTTTTGTTTCATCAGCTAACACTGTTTATATAAAAACATTGAAGAAAGGTGAGATTATGGTTTTTCCACAAGGTTTGTTGCATTTTCAAGCTACTGCTGGTAAGAGAGATGCTGTTGCTTTTGCTATCTTTAGTAGTGCTAGTCCTGGACTTCAAATCCTTGATTTTGCACTTTTTGCTAGTAATTTCTCAACTCCTTTGATTACTAAGACTACTTTTCTTGATCCTGTTCTTGTGAAGAAGCTTAAGAGTGTTCTTGGTGGAAGTGGCTAG 681 0.3935 MHHILIQKSKANILIIKMIHIILLISLLITTTSNASVQDFCVADIKASDTPAGYPCKAATTVTSDDFAYSGLIEAGNTTNIINAAVTPAFVAQFPALNGLGLSAARLDLGPAGVIPLHTHPGASELLIVKQGHITAGFVSSANTVYIKTLKKGEIMVFPQGLLHFQATAGKRDAVAFAIFSSASPGLQILDFALFASNFSTPLITKTTFLDPVLVKKLKSVLGGSG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03033 226 CDD cupin_OxOx 35 222 - -
Car07g03033 226 ProSitePatterns Germin family signature. 113 126 IPR019780 GO:0030145
Car07g03033 226 PRINTS Germin signature 118 138 IPR001929 GO:0030145
Car07g03033 226 PRINTS Germin signature 148 168 IPR001929 GO:0030145
Car07g03033 226 PRINTS Germin signature 181 196 IPR001929 GO:0030145
Car07g03033 226 Pfam Cupin 72 211 IPR006045 -
Car07g03033 226 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 22 222 - -
Car07g03033 226 Gene3D Jelly Rolls 33 225 IPR014710 -
Car07g03033 226 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 22 222 - -
Car07g03033 226 SUPERFAMILY RmlC-like cupins 35 219 IPR011051 -
Car07g03033 226 SMART Cupin_1_3 70 216 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03033 Car-Chr7 57157146 57158181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03033 34 226 Miscellaneous Gene Families AT1G72610 69.948 2.25e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03033 - - gmx:100500326 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03033 07 57157146 57158181 Car07g03033 07 57157146 57158181 ECH