Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03032 ATGATTTTAATTATTTTCCTCCTAACTCTTCTCACACATTCCACATCAAATGCATCAGTAGTAGATTTCTGTGTAGCAGATTTAACTTCTCCACAAACACCTTCAGGCTACCCATGCAAATCATCAGTAACAATTGATGACTTTGTTTTCACAAATTTCAAACCAGGAAACACATCAAATCCTTTTAAATCATCACTAACCCCTGCATTTGTTCATCAATTTCCAGCTATTAATGGACTTGGATTATCAGCAGCAAGGTTAGACTTAGGCGTCGGAGGCGTAGTTCCGATGCATTCGCATCGCGGCGCGTCGGAACTAATGATAATGGTTCAAGGTTTTATAACTGCTGGTTTTATTTCCTCTGATAACTCTGTTTTTGTTAAGACACTAACAAAGGGGGATATATTGGTAATTCCACAAGGTTTGTTGCATTTTCAATTTAATGCTGGAAAAAATAAAGCTACTGCTTTTCTTACACTTAGTAGTTCAAACCCTGGTGCACAACTTGTTGATTTTGCTTTGTTTGGAAATAGTTTGAATTCTGCTTTTGTGGAAAAAACTACTTTTCTTGATCACGCTCAAGTTAAAAAACTTAAGGCTGTTTTTGGAGGGAGTGGCTAG 621 0.3704 MILIIFLLTLLTHSTSNASVVDFCVADLTSPQTPSGYPCKSSVTIDDFVFTNFKPGNTSNPFKSSLTPAFVHQFPAINGLGLSAARLDLGVGGVVPMHSHRGASELMIMVQGFITAGFISSDNSVFVKTLTKGDILVIPQGLLHFQFNAGKNKATAFLTLSSSNPGAQLVDFALFGNSLNSAFVEKTTFLDHAQVKKLKAVFGGSG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03032 206 SUPERFAMILY RmlC-like cupins 20 201 IPR011051 -
Car07g03032 206 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 5 202 - -
Car07g03032 206 Pfam Cupin 53 196 IPR006045 -
Car07g03032 206 CDD cupin_OxOx 16 202 - -
Car07g03032 206 PRINTS Germin signature 98 118 IPR001929 GO:0030145
Car07g03032 206 PRINTS Germin signature 128 148 IPR001929 GO:0030145
Car07g03032 206 PRINTS Germin signature 161 176 IPR001929 GO:0030145
Car07g03032 206 Gene3D Jelly Rolls 17 206 IPR014710 -
Car07g03032 206 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 5 202 - -
Car07g03032 206 SMART Cupin_1_3 51 196 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03032 Car-Chr7 57147254 57148056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03032 1 205 Miscellaneous Gene Families AT5G20630 56.731 6.13e-77 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03032 - - lja:Lj3g3v2590370.1 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03032 07 57147254 57148056 Car07g03032 07 57147254 57148056 ECH