Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03031 ATGAAAATGATTCACACACTTTTGCTTCTCATTCTTCTCTCACAATCCACAACCTTTTCCCATGCATCTGTCCATGATTTCTGTGTAGCTGACTTAAAAGCTCCAGAAACCCCAACCGGCTACCACTGCAAACCTCTAACAAACATCACCGCCGACGATTTCGTCTTCCACGGCTTCGTCGCCGGAGACACAAAAAACACATTCAACGCCGCACTCACCTCCGCATTCGTCACCGACTTCCCCGGTGTCAACGGACTCGGAATCTCCGCAGCCCGACTAGACATCGCAGAAGGCGGATCGATCCCCATGCACACGCATCCCGGGGCTACGGAGTTATTGATAATGGTTAAAGGTGAAATAACAGCTGGATTTATGACAACTAGTGCTGTTTATTCGAAAAAATTGAAAGTTGGTGATGTAATGGTTTTTCCACAAGGGATGTTGCATTTTCAAGTTAATTCTGGTAAAGGAGAAGCCACTGCTTTTCTTAGTTTTAGTAGTGCAAACCCTGGTGCTCAATTGCTTGATCTTCTTTTGTTTGCTAATAATTTGTCTTCTGATTTCGTTGCACAAACTACTTTTCTTGATGTTGCACAAAGCCAAGCTTCGACTGCGACTGCTTGTCACTTTTGGGCGCCTTCTTCCATCACTCGAGAAATTCAGCACCGTCAAAGATCTCTTGATTCCTCGCGGCCGGGTTGGCTTGGAAGCAAGCTACATGTCGCCTATCTCAACCCGTTTCTTATTATTAGTAAGATAGGTTGCCCCTTGCTCTTTGCTCCAGGTTGGGCACTCTATTGGTTCTTACATATTTGTTGGAATATCACTTTCTTCCCACAAGTGTGTTAG 849 0.4523 MKMIHTLLLLILLSQSTTFSHASVHDFCVADLKAPETPTGYHCKPLTNITADDFVFHGFVAGDTKNTFNAALTSAFVTDFPGVNGLGISAARLDIAEGGSIPMHTHPGATELLIMVKGEITAGFMTTSAVYSKKLKVGDVMVFPQGMLHFQVNSGKGEATAFLSFSSANPGAQLLDLLLFANNLSSDFVAQTTFLDVAQSQASTATACHFWAPSSITREIQHRQRSLDSSRPGWLGSKLHVAYLNPFLIISKIGCPLLFAPGWALYWFLHICWNITFFPQVC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03031 282 CDD cupin_OxOx 20 199 - -
Car07g03031 282 PANTHER GERMIN-LIKE PROTEIN 8 202 - -
Car07g03031 282 Gene3D Jelly Rolls 21 206 IPR014710 -
Car07g03031 282 PRINTS Germin signature 104 124 IPR001929 GO:0030145
Car07g03031 282 PRINTS Germin signature 133 153 IPR001929 GO:0030145
Car07g03031 282 PRINTS Germin signature 166 181 IPR001929 GO:0030145
Car07g03031 282 SUPERFAMILY RmlC-like cupins 25 192 IPR011051 -
Car07g03031 282 ProSitePatterns Germin family signature. 99 112 IPR019780 GO:0030145
Car07g03031 282 Pfam Cupin 66 199 IPR006045 -
Car07g03031 282 SMART Cupin_1_3 57 201 IPR006045 -
Car07g03031 282 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 8 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03031 Car-Chr7 57129972 57133284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03031 1 199 Miscellaneous Gene Families AT5G20630 53.731 9.79e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03031 - - gmx:100783206 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03031 07 57129972 57133284 Car07g03031 07 57129972 57133284 ECH